Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139398519
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Entry
139398519 CDS
T10872
Name
(RefSeq) poly(rC)-binding protein 4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139398519
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
139398519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
139398519
NCBI-ProteinID:
XP_071000567
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MNVVFCSLLLLPTSPSLHPSIPTSQSSARINISEGSCPERIITITGPTDCVFRAFTMITL
KLEEDLTTLVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDL
LPNSTERGVTISGTQDAIIQCVKLICTVILESPPKGATVPYRPSPSPGTVMISGNQVFEA
SEYGSHPLFQLAQGGLDLQQTYAVQNQYGIPHSELAKLHQLSMQQQGLAAQMNQQQTNSV
IPGMDSNSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDSTSDRAVTI
TGTPISINLAQYLITSCLETAKSTAQSSSMSNPADLTMAYSQPPSPAQSSAVAAATLAAM
GCPGMSHPHPHAAVPMMGTHPYGALPLSSLLGMQSMKSIQSVPFLALSNPAANAAAAAGA
HAQAQISYTAKISSANGIGKKPERQKFAPY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtcttctgttctcttctcctcctccccacctctccatccctccatccctct
atccctacatcacagagcagcgcccgtatcaacatctcagagggctcgtgtccagagagg
atcatcactattacaggacctacagactgtgtcttcagagccttcactatgatcactctc
aaactggaagaggacctcacaactctggtagccaatggcacggtcaccagcaagcccccc
gtcaccctacgtttggtcattcctgccagccaatgcggttctctcatcgggaagggcggc
tccaagatcaaggagatcagagagaccacgggggcacaagtacaggtagcgggagacctc
cttcccaactccactgagagaggtgtgacgatatccgggacccaagacgccatcatccaa
tgtgtcaagctcatctgcactgtcattctcgagtcccctccgaagggggccactgttcca
tatcgaccaagcccctccccaggaacagtcatgatctccgggaaccaggtgttcgaggcg
tctgagtacgggtcacaccccctcttccaattggcccagggaggactggatctacaacaa
acgtacgctgtacagaaccaatatggcattccacattcagagttggccaagcttcaccag
ttgtctatgcagcagcaaggcctggccgcccagatgaaccaacagcagaccaactctgtc
atacctggaatggactccaattcacagaccacatcacaggagctactcattccaaatgat
ctcatcggctccatcatcgggcgtcagggcaccaagatcaatgagatccgccaggtgtca
ggggctcagataaagatcggtagccagctggacagcaccagtgatagagccgtcaccatc
acagggacacccatctctatcaacctggcccaatacctcatcacctcctgtttagagacc
gccaaatccaccgcccagtcttcctccatgtcgaaccctgctgacctcaccatggcctac
agccaaccgccctcaccagcccagtcttcagctgtggctgctgccaccctggctgccatg
ggctgccctggcatgtcccacccccacccccacgctgcagtccccatgatgggcacccac
ccctatggggccctccccctctccagcctccttggaatgcaatccatgaaatccatccaa
tctgtacccttcctggctttatccaaccctgccgccaatgcagccgccgccgctggggcc
catgcccaggcccagatctcctacacagcgaagatctcctcggccaatgggatcgggaag
aaaccggagagacagaagtttgcgccatactga
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