Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139398789
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Entry
139398789 CDS
T10872
Name
(RefSeq) interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog
KO
K24540
interferon-inducible double-stranded RNA-dependent protein kinase activator A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139398789
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
RISC loading complex
139398789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
DSRM_2
DND1_DSRM
Staufen_C
Motif
Other DBs
NCBI-GeneID:
139398789
NCBI-ProteinID:
XP_071000675
LinkDB
All DBs
Position
3:complement(55490310..55495386)
Genome browser
AA seq
308 aa
AA seq
DB search
MSQDGFQPTLIRTTHNNNTSMSIQQTQAPCPGKTPIQILHEYGTKIGNLPVYVMEKAEGE
AHQPSFIFNVTIGDVSCTGQGSSKKAAKHQAAESALNLLEIDAGTPLHIKTESNGIPAEP
NDQPNSVGILQELALQRGWRLPEYTVLMEAGPPHKREFTVTCRMESLTETAMGNSKKVAK
KAAAEKMVAKLQNLSGCPEITWTPKPSVRLENLRNSSAEKMSLLRRNPLSIPNTDYIQMM
LELSNEQGFEVTYFDIDELTVNGQYQCLAELSTSPVTVCHGTGISCGNAHNDAAHSALQY
IKIMASIK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacggattccaacctacactaataaggaccacgcacaataacaacacgagc
atgagtattcaacaaactcaggcaccgtgccctggtaaaacgccaatacaaattctgcat
gaatacggaaccaaaattggtaaccttcccgtgtacgtgatggaaaaggctgaaggggag
gcacaccaacccagtttcatctttaacgtgacaataggcgatgtgtcctgcacaggtcaa
ggatccagtaaaaaagctgccaaacaccaggccgctgagtctgccctgaaccttctggaa
atagatgctgggacaccccttcacataaagacggagagtaacggcatcccagcagagccc
aacgatcaacccaactcagtggggattctgcaggagctggcactgcagcggggatggcgc
ctccctgaatacactgttctcatggaggcgggcccacctcacaagagagagttcactgtt
acctgcagaatggagtcactgacagagacggcaatgggaaattccaagaaggtggccaaa
aaggcagctgcggagaagatggtggctaaacttcagaatctgtctggctgtcctgaaatc
acatggaccccgaagcccagtgtccgtctggagaacttgcgtaactcctctgcagagaag
atgtctctcctgagaaggaacccactcagcattcccaacaccgactatatccagatgatg
ctggagctgtccaatgagcagggcttcgaagtcacatactttgacattgatgagctgact
gtgaacgggcagtaccagtgcctggcagagctgtccacctcacctgtcaccgtatgccac
ggcacgggcatctcctgcggcaacgcacacaatgacgccgcacacagcgcacttcagtac
atcaagatcatggcttctatcaaatga
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