Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139399005
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Entry
139399005 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein 1-like
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
139399005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139399005
04131 Membrane trafficking [BR:
ocla04131
]
139399005
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
139399005
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
139399005
Autophagy
Mitophagy
Other mitophagy associated proteins
139399005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
ZapB
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
139399005
NCBI-ProteinID:
XP_071000743
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MNLSFDDQSLDNLDPTISLNDPSDIDTALLNDIDDMLQLINNQDMVEFNQDMAGLFDPPQ
FTGVTPTQDLPALSLPHSTTSPPSTTSSILSSSPHLDALLGPPIIRSSSPPDKAFHPPTF
QQSPLAQVTTSTPVPLPRPQPAPQQGSPSAQAAQGLRESKVDLPLPVLSPPAPVPVQLPP
PASSPHTVPGQSPVFSAAPQALFTSPXPQQSQAHTQQIRINYSTHNGYKAVNHQGGPAQP
MVSLSSSPSGVQPMTIQALTTTAPLLTTSASPPAQTIASHHIQQVLLQPQFIKAESLLLT
TLNRDPCMVTTVASPCITSLATTTSQSTHSLQALMSGGTFLTTVPVMMDSDKLPINRITI
SSKPMGLPPKGEKRTAHNAIEKRYRSSINDKILELKDLVAGTEAKLNKSAILKKAIDYIR
YLQQSNQKLKKENMALKMSAQKNKSLKDLVAMEVDGPQTDVKSELPTPPPSDVGSPTSYS
HCGSDSEPDSPMGEDSKPAVNLMDTSSSTPGSAGMLDRSRMALCTFTFLFLSLNPLAAML
CGGMGSSTTANNQAVHPGTGRIMLGLDNAADSWGWMDWVLPTLLVWLLNGVLVAGVLVRV
LVYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLA
CAALWALLRLCLQRLGVGRWLAARAGGLRARGLREDARMSSRDAALVYHRLHQLHMTGKL
GGSHLSAVHMALSAVNLAECSGSCLPVATLGEIYVSAALRVKASLPRLLHFSSRVFLSSA
RQACLSFSGSVPPAMQWLCHPLGHRFFVDGDWAVRSTPKDSIYSQAGNTVDPLAQVTQAF
REHLLEKALYCVAQPRGEKTPSDGEGEYADALEYLQLLTSASDAAGANTQSFAIGSNMAT
VTGCDLHSKWWSSVAVVIINWLQGDDAAAERLYPAAEHLPRSLQTAESPLPKASLNTFRA
VRAMLTKPENCQLSLSHSERASGLLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNVW
RLQQSSSPGGLSLQASPAELHGFQQDLSSLRKLAQSFRPAMRRLFLHEATARLMAGASPT
RTHQLLDRSLRRRATPGAKT
NT seq
3301 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtcttttgacgatcagtcactggataatctggatccaaccatatccctaaat
gaccccagcgatattgacacggctctgctcaatgacattgatgacatgctgcagctcatc
aacaaccaggacatggtggagttcaaccaggacatggcgggtctctttgacccccctcag
ttcacaggggtcacccctacccaggacctccctgccctcagcctgccccattccaccacc
tcccctccatccaccacctcctcaatcctgagcagcagcccccaccttgatgctctcctg
gggccccccatcatccgcagttcctcccccccagacaaggccttccacccccccaccttc
cagcagtcacccctggcccaagtcaccacttccacccctgtaccactacctaggccgcag
ccagctccccagcagggctctccatcagcccaggctgctcagggtctcagggagtccaag
gtggacctgcccctgccagtcctctcccccccagcccctgttccagtccagcttcctccc
ccagcctcctccccccatactgtacccggccagagccccgtgttcagcgccgccccccaa
gccctgttcacctctcctngcccccagcagtcccaggcccacacccagcagatacggatt
aactacagcacccacaatggctacaaagctgtcaatcatcaaggaggccccgcccagccc
atggtcagcctgtcgtcgtccccttccggtgttcagccaatgaccatccaggctctgacc
accacggcccccctcctgaccacctcagcaagccccccagctcagaccatcgcatcacat
cacattcaacaagtattgctccagccccagtttatcaaggctgagtctctgctgcttacc
accctgaaccgtgacccctgtatggtcactactgtggcctctccatgcatcacctccctg
gccaccaccacatcccagagcacccactcactgcaggctctgatgagtggtggcaccttc
ctgaccacagtgccagtgatgatggactctgacaagctgcccatcaaccgtatcacaatc
agcagtaaacctatgggcctgccccccaagggcgagaagcgcaccgcccacaacgccatc
gagaagcgctaccgctcatccatcaacgacaagatccttgagcttaaagacctggtggcc
gggactgaggccaagctcaacaagtcggcaattctgaagaaggcaatagactacatccgc
tacctgcagcagtccaaccagaaactgaaaaaagagaacatggccctgaagatgtctgcc
cagaagaacaagtctctgaaggacctggttgccatggaggtggatggcccacagacggac
gtaaagagcgagctacccaccccgccgccatccgacgtgggctctcccacctcctactcc
cactgtggcagcgactcagaacccgacagccccatgggggaggacagcaagccggcggtc
aatctgatggacacgtcctcgtccactccgggcagtgctggcatgctggaccgctcccgc
atggcgctgtgcacattcaccttcctcttcctctccctcaatcccctggctgccatgctg
tgtggagggatgggctccagcaccaccgctaacaaccaagcagtgcatcctgggacaggc
aggatcatgctgggcctagacaacgcagctgactcgtggggctggatggactgggtgcta
cccactctgttggtgtggctgctgaatggtgtgctggtggctggggttctggtccgagtg
ttggtctatggagagccagtcaccaggccccactctggatcctccgtgctgttctggagg
caccgcaagcaggcagacctcgacctggcacggggagactttgcccaggccagtcagaac
ctatggacctgcctcaaggccctgggtcgccccttacccacctctcagttggacctggcc
tgtgccgccctgtgggccctgctccgcctctgcctccagcgactaggggtgggtcgctgg
ttggctgccagggctggggggctccgcgccagggggctccgggaggatgctcgcatgagc
agccgcgacgctgccctggtctaccaccgcctgcaccagctgcacatgaccggtaagctg
ggcggtagccacctgtctgcggttcacatggctctgagtgctgtaaacctggccgagtgt
tcaggctcctgtctccccgtggccacgctaggagagatctacgtctctgcagccctacga
gtcaaagccagcctacccagactccttcacttctcctcccgtgtgttcctgagcagtgcc
cgccaggcgtgtctctccttcagtggcagtgtccccccggccatgcagtggctctgtcac
cctctgggccaccgcttctttgtggacggggactgggccgtccgcagcacccccaaagat
agcatctacagccaggcagggaacacagtggaccctctggcccaggtgacccaggccttt
agggaacaccttttggagaaggctctatactgtgtggcccagccccggggggagaagacc
cccagtgatggagaaggggagtatgcggatgctctggagtaccttcagctgttgactagt
gcatcagacgccgccggagccaacacccagtccttcgccatcggatccaacatggccacc
gtcactggctgtgaccttcattccaaatggtggtcgtcggttgccgtggtgatcattaac
tggctccaaggagacgacgcagcggctgagagactgtaccccgccgccgagcacctgccc
cgtagtctacagactgcagagagtccgttgcccaaggcgtctttgaacacgttccgagcg
gtgcgcgccatgctgaccaaaccagagaactgtcagctgagtctgagccacagtgagagg
gccagcggcctgctgagagacagcctcaacctgggaccacactgtcacagcagcagccta
gacaaggtggtccagttgctgctgtgtgacctgctgctggtgatgcggactaacgtgtgg
cgtctgcagcagagctccagtcccgggggtctctccttgcaggcctccccggccgagctg
cacggcttccagcaggacctctcctccctcaggaagctggcccagagtttcaggcccgcc
atgcgcaggttgtttcttcatgaggcaactgccaggctgatggctggggccagtcccacg
cgaacacatcagctcctggaccgctcgctcagacgcagagccacccccggagccaagacg
g
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integrated database retrieval system
