Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139399202
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Entry
139399202 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR-like
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139399202
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139399202
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139399202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4501
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
139399202
NCBI-ProteinID:
XP_071000813
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MKAHVVPYYNVPGSLMVCIIHTLWWYENVVESVQKCENMGCVVWSKVGMTVEDTMRIGDG
SAHCDVPTTLARNIYNGSVANDVSPPSSGEGEKMFQKGSHIESLFLCLLLVSCPPCLRSE
YSSCGEFEFYNQTFSSCRPCPPCQPGQEPHMNCGYGTKDENFVCVSCPAGKYSKGKYEIC
RRHKDCEGLYRATVLTSGTPDSDADCGPCLPGYYIQENRPRNLYGMVCHSCQNAPRNTKE
CMLTKVPSVSTSSTTMFPHPHKDATGQGHLATALIIAMSTIFIMAIAIVLIIMFYILKAK
PSGQACCSGQVVKAVEAQTNKQEDKKDVP
NT seq
988 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcacgttgtcccatactacaacgtaccgggttctttgatggtctgcatcatt
catacgctctggtggtatgagaacgttgtggagtctgtccagaaatgtgagaatatgggc
tgtgttgtatggtccaaggttggcatgacggtggaggacaccatgcgtataggagatggc
agcgcacattgtgatgttcccaccacgttggccaggaacatctataatggctctgtggcc
aatgacgtttctcccccttcttctggggaaggtgagaagatgtttcagaaaggaagtcac
atagagtccctcttcctctgtttgttgttggtgtcctgtcctccctgtctcaggtcagag
tacagtagttgtggagagtttgaattctacaaccagaccttcagtagctgccggccctgc
cctccatgccagcctggacaggagccccacatgaactgtggctatgggactaaggatgag
aactttgtgtgtgtgtcttgtcctgcggggaagtactcaaaggggaagtatgagatctgc
aggagacataaggactgtgaaggtctgtaccgcgctacagtactcacatctgggacacca
gacagtgacgcagactgtggaccctgcttacccgggtattacatccaggagaaccggccc
aggaacctgtatgggatggtctgtcactcgtgtcagaacgcaccgcgcaacactaaagag
tgcatgcttaccaaagtccccagtgtctcaaccagcagtactaccatgttccctcaccct
cacaaagacgccacaggacagggtcacctagcaaccgctctcatcattgccatgtcaacc
atctttatcatggccatcgccatcgtcctcattatcatgttctacatcctcaaagccaag
cccagcggacaggcgtgctgctcaggtcaggtggtgaaggctgtggaggctcagaccaac
aaacaggaggacaagaaagatgttccag
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