Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139399443
Help
Entry
139399443 CDS
T10872
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139399443
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139399443
Proteoglycans [BR:
ocla00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
139399443
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139399443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Fz
DUF5856
Zn_ribbon_9
Motif
Other DBs
NCBI-GeneID:
139399443
NCBI-ProteinID:
XP_071000954
LinkDB
All DBs
Position
3:complement(56272656..56382964)
Genome browser
AA seq
559 aa
AA seq
DB search
MLRYQTVLWTFSLLSVAAGSDFKARNCSGVKEASIAKGFSFENVPLQQMSGDHLRVCPQG
NTCCSSEMEDKFGQQSKLELENLVDETSKELRSTFVSRHKKFDEFFLELLENTEKSLNEM
FVRTYGKPYMQNSEVFQNLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
DDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVANRVSKVSSTAA
CIRALTKMMYCPYCQAMPSVKPCNNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSVQVSYRIFQGCGQPKPSGMGGRSTRGVSDVFNA
RFRPYSPEERPTTAAGTSLDRLVIDIKEKLKLFKKLWSNLPEDICQPHRVTAGNATDDDQ
CWNGHTKGRYFPEVMKDGLTNQVNNPEVGVDITRPDTFIRQQIMALRVMTNKLKNAYNGN
DIYFQDSSDEGSGSGSGSGCTEACVTEFDFASTEAPVVGADRSGSGPVEDSAAATHPAPS
AALLASLALSVLALHRLWR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgctgagataccagacggtcctttggactttctcattgctgtctgttgcagctggatcc
gattttaaagcacgtaactgcagtggggttaaagaagcttctattgcaaaaggcttcagc
tttgaaaatgttcctctccaacaaatgtcaggtgaccatctccgggtatgtccccagggc
aatacctgttgcagttcagaaatggaggacaagtttggtcaacaaagcaagctggagtta
gagaacctggttgatgaaactagtaaagaattgcgaagcaccttcgtctccagacataaa
aagtttgatgagttcttcctggagctgctggagaacacggagaagtccctgaacgagatg
ttcgtgcggacctatggcaagccttacatgcagaactcagaagtcttccagaacctgttt
gccgagctgaagcgctactacactgggggcaacgtgaacctggaggagatgctcaacgac
ttctggtcgcggctgctggagcgcatgttcacgctgctcaactcccagtacgtcatcaca
gatgactatctggagtgcatcagcaagtacacagaccagctcaaaccctttggagacgtg
cccaggaagctcaaggctcaggttacaagggccttcattgcagcccgcacattcgtccag
gggctctcggttggtcgagaggtggccaacagggtgtccaaggtgagcagcaccgcagcg
tgtatccgagcactgaccaagatgatgtactgcccatactgccaagccatgccctccgtg
aagccctgtaacaactattgtctgaacgtcatgaagggctgtctcgccaaccaggccgat
ctggacccagagtggaaccagtacatcgatgccatgttgctggtggcacagaggctggag
ggacccttcaacatcgagtctgtcatggaacccattgatgtcaaaatttcggaggccatc
atgaatatgcaagataacagtgtccaagtctcctacaggatttttcaaggctgcggccaa
ccaaagccctcaggaatgggcggcaggtctacccggggcgtctcggatgtgttcaacgcc
cgcttcaggccctacagcccagaggagcggcccaccactgcagctggcaccagcctggac
agactggtgattgacatcaaggagaaactgaagctgttcaagaagttgtggtccaacctg
cctgaggacatctgccagccacacagggtgacagcagggaatgccaccgatgacgaccag
tgttggaatgggcacaccaagggcaggtatttcccagaggttatgaaagacggattgacc
aatcaggtgaataacccggaggtgggcgtggacatcaccaggcctgacacgttcattcgc
cagcagatcatggctctgagagtgatgacaaacaagttaaaaaatgcctacaatggcaat
gatatctactttcaagactcaagtgatgagggcagtggctcaggcagtggcagcggctgc
acggaggcctgcgtcactgagtttgactttgccagcaccgaggcaccggtggtgggagcg
gaccggagcgggagcggcccggtggaggattcagcagcagccacacaccctgccccctca
gcagccctgctggccagcctggccctctcagtcctggcactgcacaggctatggagataa
DBGET
integrated database retrieval system
