KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139399458
Entry
139399458         CDS       T10872                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4-like isoform X1
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla02010  ABC transporters
ocla04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    139399458
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    139399458
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ocla02000]
    139399458
Transporters [BR:ocla02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    139399458
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_21 AAA_16 AAA_29 RsgA_GTPase MMR_HSR1 AAA_22 nSTAND1 AAA_23 Dynamin_N DUF87 NPHP3_N MeaB AAA_PrkA
Other DBs
NCBI-GeneID: 139399458
NCBI-ProteinID: XP_071000977
LinkDB
Position
3:56134985..56191748
AA seq 1331 aa
MEPLRKEAKDNPSATANLLSKIFFCWLNPLFRIGYNRRLEEHDMYKVLPEDGSERLGEDL
QWYWDQEVQWAAKDLRTPRLTRVLIACYWRSYSVIGIFTLIEEIIKVIQPVLLGKLIRYF
ESYDPDNMDALYEACGYAAGVSLSTLGLAALHHLYFYHVQRAGMKIRVAMCHMIYRKALC
LNSTALGKTTTGQIVNLLSNDVNKFDEVTIFLHFLWVGPLQAAAVMVLLWYEIGPSCLAG
MAVLVFLMPIQTLFGRLFSSFRGTTAALTDNRIRTMNEVVSGIRIIKMYAWEKPFAALVD
EVRRKEISKIMKSSYLRGLNMASFFVASKIIVFITFTVYVLMGNRISASRVFVAVSLYGA
VRLTVTLFFPNAVEKVSEALISIRRIKNFLMLEEVGSAQDLGLPVAEKKDCMVEIKDLIC
FWNKALDSPTLQNLSFTLRSEQLLAVIGPVGAGKSSLLSTILGELTPDKGVVKFKGELTY
ASQQPWIFPGTIRSNILFGKALHPQKYERVLRACALKRDMELLPDGDLEVIGDRGATLSG
GQKARVSLARAVYQDADIYLLDDPLSAVDAEVGKHLFEQCICGLLRKKPRILVTHQLQYL
KAADQILVLKEGHMVARGTFTELQGSGLDFTSLLKKDEEDEEEGKGEPAPDTLTGSPHTL
SQSSMPSLSSSMHSVMEGVDQPEPVQHVLEESRSEGTIGLHLYLKYFRAGANVLVLLALV
FLNLLAHITYILQDWWLAYWASEQEHLNVTEPIHNGSSATQQLDLDLYLGVYAGLTGATI
VFGFLRSLVFFNVLVNSAQTLHNRMFTAILRTPVRFFDINPIGRILNRFSKDIGYLDSLL
PWTFVDFIQVFLQILGVIIVAAAIIPWILIPVVPLLVVFLFLRRYFLQTSRDIKRLESTT
RSPVFTHLSSSLQGLWTIRAFKAQQRFQQAFDAHQDLHSEAWFLFLTTSRWFALRLDGIC
SIFVTLTTFGCLFLRDDLKAGAVGLALSYAVTLVGMFQWGVRQSAEVENMMTSVERVVEY
TELESEAPWETDKRPPPDWPRHGFITFDQVNFSYYADSPPVLKNITAVFRSREKVGIVGR
TGAGKSSLISALFRLAEPDGRISIDGVLTAEIGLHTLRQRISIIPQDPVLFTGTMRKNLD
PFSQHTDEDLWNALGEVQLRTVVEELPGRLETMLAESGSNFSVGQRQLVCLARAILRRNK
ILIIDEATANVDPRTDGLIQQTIREKFRECTVLTIAHRLNTIIDCDRILVRPPSSVLDAG
RIQEYDEPYVLLQNQEGVFYQMVQQTGKAEAASLLHAAKQVHMNKSHPNVINGLTDLSPS
EGSCVIFETAL
NT seq 3996 nt   +upstreamnt  +downstreamnt
atggaacctttgcggaaagaggcgaaggataatccatcggctacagctaatcttctttcc
aagattttcttctgctggctgaatcctttattccgtatcggctataatcgaaggctagag
gaacatgacatgtacaaagttctcccagaggatggatctgagagactaggagaagattta
cagtggtactgggatcaagaagtacagtgggctgctaaggacctgcgcacacccagacta
accagagtcctcattgcgtgctattggaggtcctattctgtcataggaatatttactctc
attgaggaaattatcaaagtgattcagccagtacttcttgggaagctcatccggtatttt
gagagctatgaccctgacaacatggatgctctgtatgaggcctgtggctatgctgcaggc
gtctccctgtccaccctgggtctggctgctctgcaccacctctacttctaccacgtgcag
cgagccggcatgaagatccgggtggccatgtgtcacatgatctatcggaaggccctctgt
cttaacagcacagcgctgggaaaaaccaccactggacaaatcgtcaacctcttatccaac
gacgtcaacaagtttgatgaggtcaccatctttttgcacttcctctgggtgggtcctcta
caagcagcggctgtgatggtgttgttatggtatgagatcggcccatcatgccttgcagga
atggccgtcctggtcttcctgatgcctatacagactctgtttggtcgcctgttctcctct
ttcaggggcacaaccgcagccttgacagacaacagaatacgcacgatgaatgaagtggtc
tctgggatccggatcatcaagatgtatgcctgggagaagccttttgcagctctggtagat
gaagtcagaaggaaggagatctccaagatcatgaagagctcttacctgagaggcctcaac
atggcctccttctttgtggccagcaagatcatcgtcttcatcaccttcactgtctatgtg
ttgatggggaacaggatctctgccagccgggtatttgtggccgtttctctgtacggggct
gtgagactcaccgtcaccctcttcttccccaatgccgtagagaaggtctctgaggctctc
atcagcatccgcaggatcaagaattttcttatgttggaggaagttggttcggcgcaggat
cttggactccctgtggcagagaagaaggactgtatggtggaaataaaggatttaatctgc
ttctggaacaaggcactagactctccgacgctgcagaacctgtctttcactttgaggtca
gagcaactcctggctgtcattggaccagtcggggctggaaagtcctctctactcagcacc
atcctgggggagctgaccccggataagggcgtggtcaagttcaaaggcgaactgacctat
gcatcccagcagccctggattttcccagggaccatcaggagtaacatcctgtttggcaaa
gcgctccaccctcagaagtatgagagggtcctccgagcctgcgccctcaagagagacatg
gagctgctgcctgatggggacctggaggtgataggggacagaggagccaccctcagcggg
ggacagaaggcccgggtcagcctggccagagcagtgtaccaggatgctgatatctacctg
ctggatgaccctctcagtgctgtggatgctgaggtggggaaacacctctttgagcagtgt
atctgtggcctgttgcggaagaagccgcgcatccttgtcacccaccagctgcagtacctg
aaggctgcagaccagatcctagttctgaaggaaggtcacatggtggcgcggggtacgttc
acggaactccagggctctggattagacttcacctcgctgctgaaaaaggatgaggaggac
gaggaggaggggaagggggagcctgccccagacacactcaccggctccccacacacccta
tcccagagctctatgccctccctctcctcctccatgcattctgtgatggagggagtggac
caaccagagccagtgcaacacgtgttggaggagagtcgttcagagggaaccatcggtctc
catctttatctgaagtacttcagagcaggtgctaacgtcctggttctcctggccctagtt
ttccttaacctgctggcacatatcacatatattctacaggattggtggcttgcttactgg
gcctctgaacaggagcatctcaatgtgacggagcccatccacaatggcagcagtgccact
cagcagctggaccttgacctttacttgggtgtttacgcaggtttaacaggggccaccatc
gtatttggcttcctgcgtagtcttgtgttcttcaacgtcctggtgaactcagcccagacc
ctccacaaccgcatgttcaccgccatcctccgcacccctgtccgcttcttcgacatcaat
cccattggaagaatcctcaacaggttctctaaggacattggttacctggactctctgctg
ccctggacctttgtggactttatccaggtgttcctgcagatcctgggggtgatcatcgtg
gcggccgccatcatcccctggatcctcatccccgtcgtccctctactcgtcgtcttcctg
ttcttgcgacgctacttcctgcagacctccagggacatcaagcgcctggagtccactacc
cggagcccagttttcacccacctgtcctcatccctccaaggtctgtggaccatccgtgcc
tttaaagcccagcagcggttccagcaggcatttgacgcacatcaagacctccactccgag
gcctggttcctattcctgaccacatcccgatggttcgctctgcgtctggatggcatctgc
tccatatttgtcaccctcactacctttgggtgcctgttcctcagggatgacttgaaggca
ggtgctgtgggcctggctctgtcctatgcagtaaccctcgtcggcatgtttcagtgggga
gtcagacagagtgcggaggtggagaacatgatgacttctgtggaaagggtggtggagtac
acagaactggagagcgaagcaccttgggagacagacaaacggcctccgcctgattggccc
aggcatggtttcatcaccttcgaccaggtcaacttctcctactatgcggacagtcctccg
gtcctaaagaacattactgcggtcttcagatccagagaaaaggttggcatcgtggggcgg
actggcgctggtaaaagctccctgatctcggctctgttccgcctggctgaacctgatggc
aggatttccatcgacggcgttctcaccgccgagatcggcctgcataccctgcgccagaga
atctccatcatcccccaggacccggttctcttcacgggcaccatgaggaagaatctggac
cctttcagccagcacacagacgaggacctgtggaatgcactgggagaggtgcagctgagg
accgtggtggaggagctgcctgggaggctggagaccatgctggctgagtcgggctccaac
ttcagcgtgggtcagaggcagctagtctgtctggccagggccatcctcagacggaacaaa
atcctcatcattgacgaggccaccgctaacgtggaccccagaaccgacggccttatccag
cagaccatccgggagaagttcagggagtgtactgtgctcaccatcgcccaccgactcaac
actatcatcgactgtgaccggatcctggtgaggcctccctccagtgttctagatgctggg
aggatccaggaatacgatgagccctacgttctgcttcagaaccaggaaggagtgttctac
cagatggtccagcagacaggcaaggcagaggcagcctccctgctccatgcagccaaacag
gttcacatgaacaaaagccatcccaatgtgatcaacggactgacggacctgagcccgtcc
gaggggagctgtgtcatctttgagacggccctgtga

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