Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139399512
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Entry
139399512 CDS
T10872
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139399512
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Other DBs
NCBI-GeneID:
139399512
NCBI-ProteinID:
XP_071001007
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Position
3:complement(56650259..56698009)
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AA seq
998 aa
AA seq
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MYAGRKRRKPVQRAVKQPPSEGAKSNPSKRHRDRLNGELERLASLLPFPEEVTTSLDKLS
ILRLSVSYLRAKNFFTVALKNCTCNGELANGGSDDNGKATGLANSWLPEGELLLQALNGF
ILVVTNDGTIFYSSHTIQDYLGFHQTDVMHQSVYELVHTEDQQELRSNLHWALNPPDIVA
PVTPLGETPSDAEPDSSTTATVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALSL
QGRLKFLHGQNQRQDNGGKAPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFTPMA
CDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTKDNC
WKWVQANARLVYKNGKPDYIIATQRPLMEEEGGEHLCKRSMHLPFTFATGEALLYQSNHP
IARFNDGAQGSENNVSNSKKGRTDRVSRDGLDPGSLLGALMSQDKSVYVCQPALEPKLSF
HSSLFGDRVGLSDSDPTALLQGWDESSNGVVGPGLPEPASSFDPLLATLDSLSLEGQGGV
VDREGDRGNGEACSNGELFGALEGLGLSAEDLELLLLDERMIQVEMDPERIPTLDDLLTN
DEILSYIHDSLEAKTDAAEDGSQVPSTIPGTTAPITTTTTTKAPVESNPTSATNVHSQYL
PHKSSVVGQAPIVQLSQKMHQYLSMRPGVVVQDWAQHNNHLPHPVVHGLQGQSQPIHNGQ
WTSQHILASTGVPVDHCHTPQSLFNGMASEPDGDLHRRQADQHQHYLQQHQQQDIVQSQL
PLRHAKQPDANLNGVYGIPNTHTEHHPAGKQQWQDYSHLGETTLNSNPCLSNGHIPPVTH
TTVDACMDFTMADNPSMDYIINECSYGGNEEQQGTEAAVSSYQRMNHKQQQEQLPPPLAQ
VLSSLSQCPPPNATLEQILGVGQSYRQLPSLEAYDMVTSDIPHDPNHSKMENGCIFNGAY
SGGCVLPNGNGVVPSNGQLPCPDTLSSLPDAQSSGFYL
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacgtaaaaggagaaaaccagtccagagagcggtgaaacagcccccatca
gaaggggccaagtcgaacccctccaagcgccaccgggaccgtctaaatggagagctggag
aggctggccagccttctgcccttcccagaggaggtcaccaccagcctggacaaactctcc
atcctccgcctaagtgtcagctacctccgggccaagaacttcttcactgtagccctgaag
aactgtacttgcaacggagagctggccaatggtggtagcgatgacaacggcaaagccacg
ggattggccaatagttggctgcctgaaggcgaactcttgctgcaggctctgaacggcttc
atcctggtggtcactaatgatgggaccattttttactcctctcacaccatccaggattac
ctgggcttccaccagactgatgttatgcaccagagtgtgtatgagttggttcatactgag
gaccagcaggagctgaggagtaacctccactgggccctcaacccacctgacatcgtggcc
cctgtgaccccactgggagagaccccctcagatgcggagccggacagcagcactactgcc
actgtgacctataaccctgagcagctccccccagagaactcctccttcctggagaggaac
tttgtgtgtcgcttccgatgcctcctggacaattcctctggcttcctggccctaagtctg
cagggccggctgaagttcctgcatggtcagaaccagcgccaggataacgggggcaaggcg
cccccccagctggccctgtttgccatcgctacgcccctccagcccccctccatcctggag
atccggaccaagaacatgatcttcagaaccaaacacaagctggacttcacccccatggca
tgtgacgcaaaggggaaaattgtgcttgggtatactgaagctgaacttcgggtgcgaggt
tccggctatcagtttatccatgcagcggatatgttgtactgtgctgagaaccatgtccga
atgatgaagacaggagagagcggtctgaccgtgttcagactcctcaccaaggacaactgc
tggaagtgggtccaggccaacgccaggctggtctacaagaacggcaaaccagactacatc
attgccacgcagaggcctctgatggaggaggaagggggcgagcacctatgtaaacgatcc
atgcacctccccttcaccttcgcgacgggagaggccctgctctaccagtctaaccaccca
attgcacgcttcaacgacggtgcccagggctctgagaataacgtcagcaattccaagaag
ggacggactgacagggtctccagggatggcctggacccaggctccctcttgggggcgctg
atgagtcaggataagtctgtgtacgtctgccagccggccctggagcccaagctgtccttc
cacagcagcctgtttggggaccgggtcggcctctctgactccgaccccactgctttgctc
cagggctgggatgagtcatccaatggtgtagtgggtccgggtcttccagagccggcgtca
agctttgatccactgctggcaaccctagactccctgtccctggagggtcaggggggtgtg
gtggacagggaaggggacagaggcaacggggaggcctgttccaatggggagctttttggg
gctctggagggcctggggctgagcgccgaggacctggagctgctgctgctggacgaaaga
atgatccaggtggagatggaccctgagcggattcctaccctggatgacctgctgaccaac
gacgaaatcctctcctacatccatgactccctggaggcaaagacagacgcggcagaggac
gggagccaggtgccctccactatcccgggtacaactgccccaataacgacgacaacaaca
acaaaggcacctgttgaaagtaatcccacttctgccaccaatgtgcactctcaatacctt
cctcataagtcttccgtagtggggcaggcacccatagttcagctttcccagaagatgcat
cagtacctcagcatgcgaccaggggtggtggtccaagactgggcccagcataacaatcac
ctgccccatcctgtggtgcatggactccaggggcagagtcagcccatacacaatggacaa
tggacatcccagcacattctagccagtacaggggtcccggttgaccactgtcacaccccc
cagtctctgttcaatggaatggcgtcagagccggatggggatcttcaccggcggcaagcc
gaccagcaccaacactacctccagcagcatcaacagcaggacatagttcagagccagctc
cctcttcgccatgccaaacagccggacgccaatctcaacggagtgtatggcattccaaac
acacacacagagcatcacccagctggtaaacagcagtggcaggactacagccaccttggg
gaaaccaccctgaacagcaacccctgcctcagcaatggccacatacctcccgtcacacac
accaccgtagacgcttgtatggatttcactatggctgataatcccagcatggattatatc
atcaacgaatgctcgtatggggggaacgaggagcaacaggggacagaggccgccgtttca
tcctaccagaggatgaaccacaagcagcagcaggagcagctgccccctcccttggctcag
gtgctgtccagcctctcgcagtgccctccgccaaacgctaccctggagcagatcctgggg
gttggacagtcctacagacagctgccctcactggaggcctatgacatggtaacctctgac
atccctcacgaccccaaccacagtaagatggaaaatggctgcatttttaacggggcctac
tcaggaggctgtgttctgcccaatgggaatggtgtggtgccctctaacggccagctcccc
tgccctgacactttatccagcctccctgatgcccagtcctcaggcttttacctctga
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