Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139399934
Help
Entry
139399934 CDS
T10872
Name
(RefSeq) lens epithelium-derived growth factor-like isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139399934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139399934
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
139399934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
139399934
NCBI-ProteinID:
XP_071001166
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MARDYKPGDLIFAKMKGYPHWPARINDYSDGAVKPANMKFPIFFFGTHETAFLGPKDIYP
YLPNKEKYAKPNKRKGFNEGLWEVENNPKVELNGEKQMMLSDNVTEKDSDSNPEGDEEGG
YEKRKKPKVSGAESEAGQEEDDEEDGGMQVSEQGQPQGQDDPTPNESTDTPKPKRRRKKK
SDVEADSEKEDAANSPTSSPQDGEGPTPKRRGRKTKAEKMLLLQQQDPQGSGSDMDTAES
ERKRKRTPEDKSKRGEEEKRLDGRRKKEDNKGRELEGKKDPDAKRRRQTKEESSSDSENQ
EKSKGVAGDRKRQQPTSTETGDKDDRQRRKPDEQKEQNKDDGNKVDERKGDKKKEISIES
RLQRLHGEIKISLKIDNPDVKKCLVALDELGMLQVTTQHLQKHSELIATLKKIRRFKASQ
DIMDKSTMLYNKFKSMFLLGEGDQLLSQVLNKSIAEQKQQEEARKGAQKKAERARENNTD
NNMNGDSSPDDKKQESDKEKPAEEASTGDNSSEGPRGNQLMKKHLTD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggattacaaaccgggtgacctgatctttgcgaagatgaagggctaccctcac
tggcctgccaggattaatgactactctgatggagctgtgaagccggccaacatgaagttt
cccatctttttctttggtacccatgaaactgcattcctaggccccaaagatatatatccc
tacctgcccaataaagagaagtatgccaagcctaacaagagaaagggcttcaacgaaggc
ctgtgggaggttgagaacaacccaaaggtggagctgaatggagagaagcaaatgatgctg
tcggataacgtaacggagaaggactctgacagtaacccggaaggggacgaggaaggaggt
tatgagaagaggaagaaacccaaagtgtcgggggctgagagtgaggctggacaggaggag
gatgatgaggaggatgggggcatgcaggtctctgaacagggacagccccagggccaggat
gaccccacaccaaatgaatctacagacactcccaaaccaaagagaagaaggaagaaaaag
agtgatgtagaggccgactctgagaaagaggacgctgccaacagtcccacatccagccct
caagatggagagggccccactcctaagcggcgaggcaggaagaccaaagctgagaagatg
ctcctactccagcagcaggacccccagggctcaggcagtgacatggacactgctgagtcg
gagagaaagagaaagaggacgccggaagacaagtccaagagaggagaggaggagaagagg
ctggacgggaggagaaagaaggaagacaacaaagggagagagttggaggggaagaaggac
cctgatgctaaacggaggagacagaccaaagaggagagctcctctgactcagagaaccag
gagaagagcaagggggttgcgggagaccgcaagcggcagcagcccacttcgaccgagacc
ggggacaaagacgatcgtcaacgacgcaaaccagacgagcagaaagagcaaaacaaagat
gatggaaacaaagtggatgaaaggaaaggagacaagaagaaagagatatcgatagaatcg
aggctgcagaggttgcatggagaaatcaaaatctccctcaagattgacaacccagatgtg
aagaagtgtctggtggcgttggatgagctgggcatgctgcaggtcaccacccagcacctg
cagaaacactcagagctcattgcaacactcaaaaagatccggaggttcaaggccagccag
gacatcatggacaagtccaccatgctgtacaacaagtttaagagcatgttcctgctgggg
gagggggaccagctgctcagccaggtgctcaacaagtccatagcagagcagaagcagcag
gaggaggccaggaagggagcccagaagaaggctgagcgggccagggagaacaacacagat
aacaatatgaatggcgactccagtcctgatgataagaagcaggagtcggacaaggagaag
cctgctgaagaggcctctacaggtgataacagcagtgaaggcccaagaggaaaccaactg
atgaagaaacatctgactgactaa
DBGET
integrated database retrieval system
