Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139400137
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Entry
139400137 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel gamma-5 subunit-like
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139400137
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139400137
04261 Adrenergic signaling in cardiomyocytes
139400137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139400137
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139400137
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Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
SUR7
DUF716
Claudin_3
Motif
Other DBs
NCBI-GeneID:
139400137
NCBI-ProteinID:
XP_071001263
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All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MSGCGRKALALLSSVFAVSGLGLLGVAVSTDYWLYLEEGVILPLNQTTDIRTSLHSGLWR
VCFLAGSLXSLSSSLPGEEAGRCFTIEYIMPMNLQLTSESTVSVLKMIRSATPFPLVSLF
FMFIGFVLNNIGHVRPHRTILAFVSGIFFILSGLALVVGLVLYISSINDEMLNRTKSSES
YFSYRYGWSFAFAAISFLLTESAGVMSVYLFMKRYTAEEMYQRHHPGFYRPRLSNCSDHS
GQFLHPETWARGRSPSDISSETSLQMSTSYPALLKCPDYDQVSSSPC
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgcggcaggaaggctctggcattgctgagcagcgtgtttgcggtcagcggg
ctggggcttctgggagttgcggtctctacagactactggctgtacctggaggagggggtc
atcctgcccctgaaccagaccactgacatcaggacctccctgcactctggactctggaga
gtctgcttcctggcaggctctctataatccctctcttcttctcttccaggtgaagaggca
ggtcgctgtttcaccatcgagtacatcatgcccatgaacttacagctgacctctgagtcc
acagtcagtgtacttaagatgattcgttcagccactccgtttcctctggtcagtctgttc
ttcatgttcatcggctttgtgctaaacaacatcggacacgtccgacctcatcgcaccatc
ctggcctttgtctccggaatcttctttatcctttcaggtctggctctggtggtaggtctc
gtgttgtatatatccagtattaatgacgagatgttgaacaggactaagagcagtgagtcc
tacttcagctaccggtacggctggtccttcgccttcgctgccatctcctttctgctcact
gagagtgcgggcgtcatgtccgtctacctgttcatgaagcgctacacagccgaggaaatg
taccagcgccaccaccccggcttctaccggccacgcctcagtaactgctctgaccactcc
ggtcagttcctgcacccggagacctgggcacgtggacgcagcccctcggacatctccagc
gaaacctcactccagatgagcaccagctacccggccctgctcaagtgccccgactacgac
caggtctcctcctcaccctgctga
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