Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139400156
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Entry
139400156 CDS
T10872
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
ocla04980
Cobalamin transport and metabolism
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139400156
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
139400156
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139400156
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139400156
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139400156
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139400156
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139400156
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
139400156
HMT complexes
COMPASS/SET1 complex
139400156
MLL-HCF complex
139400156
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
139400156
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
139400156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139400156
NCBI-ProteinID:
XP_071001285
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
PMGSSPQMSGMAALAAAAAATQKIPPSTATMQLPAGATMVKTVAMSPGSQTVKVASPVMV
SNPATRMLKTAAAQVGTSGVVTPGTPSRPIITVHKSGTVTVAQQHQVVTTVVGGVTKTIT
LVKSPLTMGGGGTLLTAANQGQNKVMSGKDVQHWLSNLSNLGKVMSVVQTKPGQTGAVTG
QAGSSLQHIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGTAGGKPTILSYSGMPTTT
KPGTHIIKTIPMSAIGQAGVTGSGMKSPITIITTKMMTPGTGTPGKIISAMPRTGAGQQG
LTQVVLKGAPGQPGTILRTVPMGGVRLVSPVTVSGVKPNVTTLVVKGTTGVTTFGTVTGT
VSSSLAGGSVATATPITTLGTMTTLPGQVTVSAAQAGAQPTQVTLITTPSGVDAQPVHDL
PVSILSSPTSADPSSTQPEAGDPGTVTLVCSNPPCETHETGTTNTATTASANMTGDGGVE
RVCSNPPCETHETGTTNTQTTASSNMGQVQQVCTNPPSETHDTGTTNTQTTASCNMGSNQ
QQQGSSVTNNTSGSDPPSSPPPSSSGDLSPSSLSGTSSVPGVLRPETLRTGTTYTSTTAR
SNMGSDKMGMTLSSSSSDNQSKSSSGGGGGGGGSPLTSPVCSSPPCETHQTGPTEAGAEG
RSATQVCSNPPCETHETGTTTTSTQANSSMGIGQTTGTVQRVCSNPPCETHETGTTNTPS
QTTSNLAGSGTGTGTGTGTVQRVCSNPPCETHETGTTNTPSQTTSNLTGTGTGTGTVQRV
CSNPPCETHETGTTNTPSQTTSNLTGTGTGTGTGTGTVQRVCSNPPCETHETGTTNTATT
AQPGDSTQGDNGTTEAPSSSSVTTESSAVVAAGRAVTTVTQSTPTPGPSVPEISSMSGSS
EAMVAACIEGEEAMQTDCLPEGTVRVVTLEEAAAAGIQVHVEGMEEQNQGEQEGLPAELM
SEGDAGGQQTLMVTGLTPEELAVTAAAEQAAQHAATEEANAQAMAIQAVLQAAQHAVMNE
GDSGQEGQHQTTTIPIVLTQAELAALVHQQQQLQEAQALAQAAAAAAAAAQHNQ
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
ccaatgggcagcagccctcagatgagtggcatggctgcgttggctgcagcggctgctgcc
acacagaagatcccgccctccacggccaccatgcagcttccagctggtgctactatggtc
aagaccgtggccatgagccccggttcacagactgtcaaagtagcctcgcctgttatggtt
agtaacccagcaacccgcatgctgaagactgctgcggctcaggtgggcacgtcaggtgtt
gtcacacccggaacgccttctcgccctatcatcaccgtgcacaagtctggcacggtgacg
gttgcccagcaacaccaggtggttaccacggtagtgggaggagtcaccaagacaatcacc
cttgtcaagagcccccttactatggggggaggtggaacactgctgaccgcggccaaccag
ggtcaaaacaaagtgatgtctgggaaggacgtgcagcattggctgtctaacctgtccaac
ctggggaaggtgatgtccgtggtccagaccaagcctggtcagacaggagcggtgactgga
caggctggctccagcctccagcacatcatacagacgaaaggtcccctcccggcgggaacc
atcctgaagctggtgacctcagcggatggcaagcccaccaccatcatcactacgtcccag
gccgggaccgcggggggcaagcccaccatcctatcctacagcggcatgcccaccaccacc
aagcctggcacgcacatcatcaagaccatacctatgtctgccatcggacaagcaggagtg
acaggaagtggtatgaagtcccccattaccattatcaccactaagatgatgacaccaggc
accgggacaccaggcaagatcatcagcgcaatgcccagaactggggctggtcagcaggga
ctcacacaggtggtgctgaagggtgccccaggacagcccgggactattttacggaccgtc
cccatgggaggtgtacgtctcgtctccccggtaactgtttccggtgtcaaacctaacgtc
accacccttgttgtcaagggaaccacaggtgtgacaacgtttggtacggtgactggtaca
gtgtcttcgagcctggcgggaggaagtgttgccacggctactcccatcaccaccttgggc
accatgaccactctgcctggacaggtcaccgtctccgcagctcaggcgggagctcagccc
actcaggtgaccctgatcacgacccccagtggtgtggatgctcagcctgtccacgacctc
ccggtctccatcctgtcctcccccacctccgccgacccctcgtccacccagcccgaggca
ggcgacccaggaacggtaaccctggtctgctcaaaccccccctgcgagacccacgagacc
ggcaccactaatacagctaccacggcctccgctaacatgactggtgatggtggggtggag
agggtgtgttcaaacccgccgtgcgaaacccacgagaccggcaccaccaacactcaaacg
acagcgtcctccaacatgggccaggtgcagcaggtgtgcaccaacccgccgtcagagacc
cacgatacaggtaccaccaacacccagaccaccgccagctgtaacatgggatccaaccag
caacaacaaggctccagcgtaaccaacaacaccagcgggtctgatcccccgtcctctccg
cccccctcctcctccggagacctctccccctcgtctctttctggtaccagctctgtgccc
ggggtgctacgaccggagactctgagaacagggaccacctacacctcgaccaccgcacgc
tctaacatgggctctgacaagatgggcatgacgctcagctcctcgtcctcagataaccag
agcaagtcatccagcggaggaggaggaggaggaggaggatcccccctcacctctcctgtc
tgctccagtccaccctgtgaaacgcaccagactggccccactgaggccggagctgagggc
agaagcgccacacaggtctgctccaatccaccttgtgaaacacacgagactggcactacc
actacgtcgacgcaggccaactccagtatgggcatcgggcagactacagggacagtgcag
agagtgtgttccaatcctccgtgtgagacgcacgaaacaggaaccaccaacaccccgtct
cagactacgtccaacctggcggggtcggggacagggacggggacagggacgggcacggtc
cagagagtgtgttccaatccgccgtgtgagacgcacgaaacaggaaccaccaacaccccg
tctcagactacgtccaacctgacagggacgggcacagggacgggcacggtccagagagtg
tgttccaatccgccgtgtgagacgcacgaaacaggaaccaccaacaccccgtctcagact
acgtccaacctgacaggaacggggacagggacgggcacagggacgggcacggtccagaga
gtgtgttccaatccgccgtgtgaaacacacgagaccggcaccaccaacacggctactaca
gcccagcctggtgactcgacacagggagacaacggaactacagaggctccctcgtcgtcc
tcggtaaccaccgagtccagtgccgtggtggcggctggccgagcagttaccacggttacc
cagtccacacccacacctggaccctccgtacctgagatttcgtcgatgtctgggtcgtct
gaggcgatggtggcggcatgtatagagggagaggaggccatgcagacggactgtctccca
gagggcacagtgagggtcgtgaccctggaagaggctgctgcagctgggatacaggtccat
gtggagggcatggaggaacagaaccagggggagcaggagggcctgcctgcggagctgatg
tctgaaggtgacgcggggggccagcagaccctgatggtgacgggtttaacccccgaggag
ctggctgttaccgctgcagccgagcaggcagcacaacacgctgctactgaggaggctaac
gcccaggccatggccatacaggctgtcctgcaggccgcacagcacgctgtcatgaatgaa
ggagacagtggccaggagggccagcatcaaaccaccaccatccccattgtgttgactcag
gcagagctggcagccctggtacatcaacaacaacagctgcaggaagcccaggctctggcc
caggcggcggcagcggcagcagcagcagcacagcacaaccag
DBGET
integrated database retrieval system
