KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139400255
Entry
139400255         CDS       T10872                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137  Mitophagy - animal
ocla04144  Endocytosis
ocla04145  Phagosome
ocla04148  Efferocytosis
ocla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139400255
   04145 Phagosome
    139400255
   04137 Mitophagy - animal
    139400255
   04148 Efferocytosis
    139400255
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139400255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139400255
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139400255
   04031 GTP-binding proteins [BR:ocla04031]
    139400255
Membrane trafficking [BR:ocla04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    139400255
 Endosome - Lysosome transport
    139400255
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139400255
  Exosomal proteins of other body fluids (saliva and urine)
   139400255
  Exosomal proteins of colorectal cancer cells
   139400255
  Exosomal proteins of melanoma cells
   139400255
GTP-binding proteins [BR:ocla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    139400255
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 139400255
NCBI-ProteinID: XP_071001342
LinkDB
Position
3:complement(60440169..60446365)
AA seq 218 aa
MATRGSGRPNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPEAHNTRSCCGGGGGN
NT seq 657 nt   +upstreamnt  +downstreamnt
atggctaccagagggagtggccggcccaatggcacgctgccccagaccaagatatgccag
tttaaactggtcctactgggagacatggcagtgggaaagtccagcctagttctgcgcttc
gtcaagggacagtttgatgagttccaggagaccaccatcggagctgcgttcctggcccag
tctgtgtgtctagatgacactaccgtgaagtttgagatctgggacacagcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggctgccatcgtggtcttt
gacatcaccaagccggagacgtttgagcgggctaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctctggcaggcaacaaggcggacctggctgagaag
agactagtggagtatgaggaggcccagacctattctgaagacactggacttctcttcatg
gagacctctgccaagactgccatgaatgtcaacgaacttttcctggccattgccaaaaag
atgcccaaaacggacacccagaatcctacacacgcagcgcgacacaggggagtgaaccta
caggatcctgaagcccacaacacccgatcctgctgtggaggaggaggagggaactag

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