Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139400305
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Entry
139400305 CDS
T10872
Name
(RefSeq) retinoic acid-induced protein 1-like isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
139400305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139400305
NCBI-ProteinID:
XP_071001376
LinkDB
All DBs
Position
Unknown
AA seq
2295 aa
AA seq
DB search
MQSFSRERSGFHGNQPCYQQEHHELSRLESYRQHPHHGQTRQVYEAHALATATGMPPAGP
GAGPGQGSGPITGPKDCYSQQAYPGYPQGNGGGVGGGVGGGGGSTPHDKKAYSGGSQGPP
PTPQHMQAGGYSNHMGPGGYPAQYMSEGHLQQSKWDDPAQLAQYEQEMVGRMEPGPPGSS
QYLDQNMLAHSQSQCHQPHQASAPVYTSPHHQPHPANPGQSPLMYPQSHLHYPQHPPSPS
PSSSSYMEKCSPMPHCYKGYSMPPSSQYTRQMGSHSGLKQGGYRPPPQNSYSYQQTPSRG
GYEPQPPLQGIPTPQETHPKYQHFSQPQQNYCLSELSVRSPEQYYQTCSPASSHSPARSV
GRSPSYSSTPSPLMTNPENFQYSQPPMTPGAASSSSSSSAGLQDQGLLMPPRSHPSSSPN
VAHPTPQHSYTQGVSMKERFSEKLLANPSLWSLNALTSQVENISNNVQQLLLSEAMVANK
KGAKRSSIGSSGGSSSKKEEVYKGVPGGPEAQHGGGPMQDPYSTNQHPLVPMEMQEGGYS
SSSDEQLERGYYYCGQGRSPAQAPNNTHLGLDTASSCSMTSPDDMSTRSGDSVSGLQSVA
SRDNMTPDPRSQGGHEPRQTPMKSVGDERSPVSVTIPSPMKQESQSPPDIQRLGLPLKEN
FEELAWTEKIADYEDDGVKKTSDSESDRRGSDNVTDTSEKREKWPEDEKGPALYSKINKA
VTEGKSYCYDENMYHKIQNKYDRGKGDSADKSPSLSDSSHKGDLGQEMKSEAFKSESPTD
SESSVKTSPYISRGDLDQDEYLTEKEDSSENTSPTPRGEALDQRLSASEKRESREEEEED
EEGEEERKQNSISSPLSAEEREGEESESLPSTERDLNNRTSPQEEPSGELCSRTEGQSLA
EPQPYSNTESAETESQAAQPDATAAAVESPESGSAICDTPPQSHSAMMVFSALSEIATPP
APSHTRDHIDHSDSNVLEPDSPQLPGKSILHSAPSWANTPPSPKKGDEDMEPGISCPSAV
TPSAKPEPVAPSAHPQAFGRKHGRGRRRLMHSGVEFRRQLSVEREGESAPSPPQKPCMPS
SKSALFSDQLDMAAHQDIITTSETHKLLVEGSRSRMCTRSFNAQDTPPKDPQPPERRKPG
RKPGSKPGPKPGPKSGLKPGPKPGLKPGPKPGSKPSLKPGPKPGLKPDSKPSPKPGLKPG
PKPGPKTVLKPGPKPGPKPGPKPGPKPTEGAPRGRPRGTGSKSKLAEQEGPIPPITGGPG
RGQKSLSINSQQGDGKQEVKAPGKDGKNMVLRSRKPPQDKLPKEKEKAQSEGILTQTLTG
ITKPNAVLQNEERMSIEPAIPVFPNQTDTSITDTSVTDSSKPDTSVTDTSKPDTSVTDTS
VTDTSVTDTRVTDPSKTNTSITDTSKPDTSVTDTSVTDTSVTDTRVTDPSKTNTSITDTS
KPDTSETDTIATDVSVTDTRVTDTSVSDPNVTDTSVTDTSVTDTSVTDTSIKDNSVTDNS
VTDISIPVAPPEKPKEPTVAVPLETAPVPPLKRKPSPLPLEPPVKKKRGPKPKPKPQQPQ
PETPHSDQANQPPLVKPNEMGVRGPKRRLKRGRHIKTSLITVLTKDNPPPTMADGDVVSE
MPSVPSQCPTKTKYLPPRKGRGLKYEAMVQKINSGTGSKKHPPTPQPESTEATVDEVTSK
PVSLPVSEESEAPVAAVSAPDVSREELARDVGSSTGAQNTEQERRVQQNTGEGVQPEPLP
SGVPDAAAASGANKPTRTKRRKWAMVESTDATVVAMETGSLIINTPRLAKQRAIKNNHEM
HLKQRRRKKKGGQPSEGPVAGEEVETTTAEQQTETPTDTALTTTPALPAGPGEITDSPQV
IATEMIQPPPSKRGRKPSSSPSKKRGRAPGEQQSSKPLRVHKKPGPKKGIKDAMEVIEAV
VKAAGREARLKKKKWKKESPAVSEEKQPEPSLKQVLSKTPKSRIKHSFCPYVRMDSSRDF
TSLCTIVNRRDEELKMVLQKPRKKSPDKIKNSVTVAKAIPSSSAMLQGPLVNKTLIDRCL
TCCLCGKPANYRELGDLCGPYFPEDSIPRKILSARHIETQRENREKISSNSSIREPSSST
PTSEGDPGFKKEVSKKVDMETVTKQGSSSSGGSHHHQPHPHHWRPRRAERAPAEGGSTHR
PTLRDRFRRMQKLQGERRAAEATAGGQEGGNGGGGLLQRLQGEAEAKEHWAHENCAIWTN
GIIMVAGRLYGLKEAVHTSTETSCSKCQRVGASISCCWKGCPHKYHYICAKEIGCMFQDD
NFSLKCPKHKTDRQG
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgttcagcagagagaggagcggtttccatggcaaccagccctgctaccagcag
gagcaccatgaattatcacgcctggagagctaccgacaacacccccaccacggacagacc
aggcaggtctacgaggcgcacgcgctggccaccgctacagggatgcctccagcgggacca
ggagccggacctggacaaggaagtggacccataactggacctaaggactgttacagccag
caggcataccctggatacccccagggtaatggaggcggtgtgggtggtggtgtgggtggt
ggaggaggttcgacgcctcatgataagaaggcttacagtggggggagccaaggacctcct
cccactccccagcatatgcaggcaggcggctacagcaatcacatgggcccggggggatac
ccggcccagtatatgagtgaaggccacctccagcagtctaagtgggacgacccagctcag
ctagctcagtacgagcaggagatggtaggcaggatggagccaggtccccctgggtcctcc
cagtatctggaccagaacatgctggctcactcccagagccagtgtcaccagccccaccag
gcctccgctccggtctacaccagcccacaccaccagccccatcccgcaaacccaggccag
tccccgttgatgtacccccagagccacctccactacccccaacatcccccgtccccctcg
ccatcctcctcctcctacatggagaagtgcagcccaatgccccactgttacaagggatat
agtatgccgcccagctcccagtacactaggcagatgggcagccacagtggtctgaagcag
gggggataccgcccgccaccccagaacagttacagctaccaacagactccctccaggggt
ggctatgagccccagcccccactacaaggcattcccactccccaggagacccaccccaaa
taccaacacttcagccagccccagcagaactactgtctgtccgagctgtccgtcagatcc
cctgagcagtactaccagacatgtagtcccgcctccagccactcccctgcacgctctgta
ggccgctcgccctcctacagctccaccccttcccctttgatgaccaatccagagaacttc
cagtacagccagccaccaatgaccccaggggcggcttcttcgtcctcctcttcctcagcg
ggtctgcaggaccagggcttgctgatgccgccgcgctcccacccgtcctcgtcccccaac
gtggcccacccaaccccgcagcacagctacacacagggggtttccatgaaggagcgcttc
tccgagaagctgcttgccaaccccagcctgtggagcctgaatgccctcacctctcaggtg
gagaacatctccaacaatgtgcagcagctgctgctctccgaggccatggtcgccaacaag
aagggggccaagcgcagcagcattgggagcagtggaggcagctcctccaagaaggaagag
gtttacaaaggagtgccaggaggccccgaggctcagcacggtgggggtcccatgcaggac
ccctacagcacaaaccagcacccgctcgtccccatggagatgcaggagggggggtactcc
agtagttctgacgagcagctggagagagggtactactactgcggccagggcaggagccca
gctcaggcccccaacaacacacacttgggcctggacacggcctcatcctgctccatgacc
tcaccggatgacatgtccacccggtctggtgactctgtgtccggcctgcagagcgtggct
tccagggacaacatgacccctgaccccaggtcacaggggggacacgaaccccgacaaacc
cccatgaagagcgtgggggatgagaggtcccccgtgagtgtgacgattcccagccccatg
aagcaggagagccagtctcctccagacatccaacgtcttggcttgccactgaaggaaaac
tttgaggagttggcctggacagagaaaatagcagactacgaggatgatggcgtgaaaaag
acctccgacagcgagagtgaccgcagaggcagcgataatgtcacagatacctctgagaag
cgggagaaatggccagaggacgagaaaggcccagcgctgtatagcaagatcaacaaagca
gtgaccgagggaaagagctactgctacgacgagaacatgtaccacaagatacaaaacaaa
tatgaccgaggcaaaggggactcggcggataagtccccaagcctctcagactccagccac
aagggagacctgggccaggagatgaaatcagaggccttcaaatccgaatctcccactgac
tctgagagctcagtgaagacatccccctatatttccaggggtgaccttgaccaagatgaa
tatttaacagagaaggaagacagctcggagaacacatcccctaccccacggggcgaggct
ttggaccagaggctctccgcctcagagaagagagagagcagagaagaagaggaggaggat
gaggagggggaggaggagagaaagcagaactccatatcttctcctctgtctgctgaggag
agagagggagaagagagtgagagcctgccatcaactgagagggacctcaacaatagaacg
agcccacaggaggagccttctggagaactgtgcagcagaacagaaggccagagcctggct
gagcctcagccttacagtaacacagagtctgcagagacagaaagccaagcagcacaaccg
gatgcaacagcagcagcagtagaatccccagaaagtgggtcagccatttgtgacactcca
ccccagtctcactcagccatgatggttttctcagctctcagcgagatagcaacacctcca
gctccgtctcacaccagggaccatattgatcacagcgattccaacgtgctggagcctgac
tcccctcagctgccggggaagtccatactgcactcagcgccctcctgggccaacacccca
ccctcgccaaagaaaggtgatgaggacatggagccgggcatcagctgcccaagcgctgtg
accccctcagccaagccagaacccgtggccccatctgcacacccgcaggctttcggccgg
aagcacggccgaggcaggaggagactgatgcattcaggtgtggaattcaggagacagctg
agtgtggagagagagggggagagtgccccctcgccaccgcagaaaccctgcatgccctcc
agcaagagtgctctgttctccgatcagctagacatggccgctcaccaggacataatcaca
acgagcgagacacacaaactgcttgttgagggctcccgctccagaatgtgcactcgctca
ttcaacgcgcaggacactcctcctaaggatccccagccccctgaaagacggaaaccaggg
cggaaaccaggttcgaaaccaggcccaaaaccaggcccaaagtcagggttaaaaccaggg
cctaaaccaggactaaaaccagggccaaaaccaggttcaaagccaagtctaaaaccagga
ccaaaaccaggtttgaaacccgattcgaagcccagcccaaaaccaggtttaaaaccgggg
cctaaaccaggcccaaaaacagttctaaaaccagggcctaaaccgggtccaaaaccagga
ccaaaacctggtccaaaaccaactgaaggagcaccccgtggtcgtcccaggggtacgggc
tctaagtcgaagttggcagaacaggaaggtcccattccacccataacagggggtccagga
agaggccagaagagcttgagcatcaacagtcagcaaggtgatgggaaacaggaagtgaaa
gctccaggcaaggacggaaagaacatggtcctgagatccaggaagcccccccaggataag
cttccaaaggaaaaagagaaggcgcaatctgagggaatcctgactcaaaccctgacaggt
ataacaaagcccaatgcagtgttacaaaatgaggaacgtatgagcatagagccagccatc
cctgtctttcctaaccagacagacacaagtataacagacaccagtgtaacagactccagt
aaaccagacaccagtgtaacagacaccagtaaaccagacaccagtgtaacagacaccagt
gtaacagacaccagtgtaacagacaccagagtaacagaccccagtaaaaccaacaccagt
ataacagacaccagtaaaccagacaccagtgtaacagacaccagtgtaacagacaccagt
gtaacagacaccagagtaacagaccccagtaaaaccaacaccagtataacagacaccagt
aaaccagacaccagtgaaaccgacaccattgcaacagacgtcagtgtaacagacaccaga
gtaacagacactagtgtatcagaccccaatgtaacagacaccagtgtaacagacaccagt
gtaacagacaccagcgtaacagacaccagcataaaagacaacagtgtaacagacaacagt
gtaacagacattagtatacctgtcgctccacctgagaaacctaaagaaccgactgtagct
gtacctcttgaaactgcacctgtacctccactcaaaagaaaacccagtcctctgcctcta
gagcctccggtgaagaaaaagcgaggtccaaaaccaaaaccaaaaccacaacagccccag
cctgaaactccccattctgaccaggccaaccagcctccattagtcaaacccaatgagatg
ggtgtccgagggcccaagagaaggctaaagagaggcaggcacatcaagacctctctgatc
actgtgctgaccaaagataaccctcctccaacgatggctgatggtgatgtggttagtgaa
atgcccagtgtcccttctcagtgtcccactaaaaccaagtacctccccccgcgcaaaggc
aggggtctgaaatacgaggccatggttcagaaaataaactcgggcaccggttcgaagaaa
cacccgccaacaccacagcccgagagcacagaggcgacagtagatgaagtgacgtcaaag
cctgtgtcgctgcccgtctcggaggagagcgaggccccagtggcggcggtgagcgcccct
gatgtgtcacgggaggagttagcaagagacgtggggagctccacgggggcccagaacaca
gaacaggagagaagggtgcagcagaacaccggggagggggtgcagccggagccactccca
tcaggtgtgccagacgctgcagcggcgagcggcgccaacaaacccaccaggaccaagagg
aggaaatgggccatggtagagagcacggacgccacggtggtcgccatggagacggggagc
ctgatcatcaacacgccgcggctggccaagcagagggccatcaagaacaaccacgagatg
cacctgaaacagaggaggaggaagaagaagggaggacagccttcagaggggcctgtggct
ggcgaggaggtagagacaacaacagcagaacagcagacagagacacccactgacacagcg
ttaacaacaacgcccgctctaccagccggcccaggtgagatcacagacagcccgcaggtg
atcgccacagaaatgatccagccgcctccctccaaacgagggaggaagccctcttcatcc
ccctccaaaaagagagggagagcaccaggtgaacagcagagcagcaaacctctgagggtt
cacaaaaaacctggtcctaaaaagggaatcaaagacgccatggaggtgattgaagcggtg
gtaaaggctgcagggagggaggccagactcaagaagaagaaatggaaaaaggaaagtcct
gcagtgtcagaggaaaagcagccagagccctctctcaaacaggtactgagtaagactcct
aaaagcagaatcaaacactccttctgtccatatgtgcgtatggacagctccagagacttc
acctctctctgtaccatcgtcaacaggcgcgatgaagagctgaagatggtgcttcagaag
ccccggaaaaagagcccggacaaaattaaaaactcagtcacagttgccaaggcgataccc
agctcctcagctatgctccaggggcccttggttaacaaaacgttaattgacaggtgtcta
acgtgttgcctgtgtggaaagccagcaaattaccgtgagctgggggatttgtgtgggccc
tacttcccagaggatagcatcccccgcaaaatcctgtcagcaagacatatagaaacccag
agggaaaaccgagagaaaataagctccaacagtagcatcagggaaccaagcagcagcacc
ccaacaagcgaaggagaccccggctttaaaaaggaagttagtaaaaaggtggatatggag
acagtcacaaagcagggcagtagtagtagtggtgggagtcaccatcatcagccccacccc
caccattggcgccccaggagggcagagagggcaccggcggagggcggaagcacgcaccgg
cccaccctacgggatcggttcaggaggatgcagaagctccagggggagaggagggctgcg
gaggccacagctggtggtcaggaagggggcaatggaggaggaggcctcctccagagactg
cagggggaggctgaggctaaggaacactgggcccatgagaactgtgctatctggaccaat
gggatcatcatggtggcagggaggctgtacggcctgaaagaggctgttcacacctccaca
gaaacgagctgttccaagtgccagagagtgggcgcgtccatcagctgctgctggaaaggc
tgccctcacaaataccactacatctgcgccaaggagataggctgcatgttccaagacgac
aacttttcactgaaatgtccgaaacacaagactgacagacaagggtga
DBGET
integrated database retrieval system
