Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139400331
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Entry
139400331 CDS
T10872
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139400331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139400331
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
139400331
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
139400331
Prokaryotic type
139400331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
139400331
NCBI-ProteinID:
XP_071001400
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MLAMDVPYLRRSPIMFLAAPLTATRVSTTFNFAQYTKVGRVKKLKLAGNGTTESPPSPVC
PELLARIAKNKQAALEKLSASNTPDEFGESWRKSLLSEFGKPYFINLMSFVDGERKLNTV
YPPPQHVFTWTQMCDIQDVKVVVLGQDPYHGPNQAHGLCFSVQRPIPPPPSLLNMYKELA
SDIEGFQHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSSNRE
GLVFMLWGAYAQKKGAAIDRKRHHVLPTVHPSPLSAHRGFFGCKHFSKTNELLEKSGKEP
IDWKAL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaatggatgtcccatatttgagacgttctccaataatgtttttagctgcacca
ttaacagccacacgtgtttcaacaacctttaattttgctcaatataccaaggttggacgg
gtgaagaagctgaagctagcaggcaacggaacgacggagtcacccccttctccagtgtgt
ccagaactgctggcccgaatcgccaaaaacaagcaagctgcgttggagaaactgtccgcc
agtaacacaccggatgaatttggggagagttggagaaagagtctgctctctgagtttgga
aagccttatttcataaatttgatgtctttcgttgatggagagaggaaactgaacactgtc
tacccaccccctcagcatgttttcacctggacacagatgtgtgacatccaagatgtcaag
gttgtagtcctcggtcaggacccatatcacggtccaaaccaagcccatggattatgcttc
agtgtgcagagacctatcccacctccacccagcttgttgaatatgtacaaagaattggcg
tctgatatagagggcttccagcaccctggacatggagatttaactggatgggctaaacaa
ggtgtcttgctgctcaatgctgtgctgaccgtccgagctcaccaggccaactctcacaaa
gacaagggctgggaaactttcactgacgctgtggtgcagtggctcagctccaaccgggag
ggcctcgtcttcatgctgtggggggcctatgctcagaagaagggagcagctattgatagg
aaacgtcaccatgtccttcccactgtacacccctcccctttatctgctcatcgaggcttc
tttggatgcaagcacttttccaagaccaatgagttgctggagaaatcagggaaggagccc
atagactggaaggcactttga
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