Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139400546
Help
Entry
139400546 CDS
T10872
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11581
shugoshin-like 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139400546
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
Shugoshin
139400546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Shugoshin_C
RNase_J_C
Motif
Other DBs
NCBI-GeneID:
139400546
NCBI-ProteinID:
XP_071001438
LinkDB
All DBs
Position
3:61027014..61033351
Genome browser
AA seq
1106 aa
AA seq
DB search
MNMSAEGRTLLSTMLPGKKPMPSKAAKNNSLTVASKIKTKILNTSSFFKVSLKTNNKALA
LALVAQRERSRQLEVETVHLRKQVESLNFDLAIRRFKHNQLIIILKDFQRNTLDNLERAV
DLFSDENGRDVGESHFEWESHHYHGNGSRPLKGQLKVFVSQDSPEISEDRNKPPPDKKEE
NCQMERVVVQIPLIIAEQSRDLVSPSKQTSMSQEVVVNDRGTTSTNPFGTQSRSSESNAS
KDSINKMEQQVDNTLKSTQKRTSRQSSSLKDEVEKWSKIYSDAGLDPIPAVLPSVVSTTN
ILQPSGTDKVVHHPNSLKVETTLAHAIKTAVGEAEKTTINDTEMEITIGDSAAEIVTVET
KPKKAGGPKKLKVPKTKIPCLLVKIGSKNCGPTHVVENLEVKSSAVNVELPTAIQKVFSA
TPLHTDNPTAEGVDVEHREENFIENSASEIESLVARRKTYVTSRITKHKKPTRESHKTTQ
DFPKTFDPRKTFGVPLQSKSHRSVSPDPFEDDFFDDPEAQKSVFKLAGANPLVIDATENK
VTKTKGHKTFVISNFVISNEPTSRKGQKKSKERRKTKAQPVMVDHELHIETEKDPFLLPQ
SLIEEESHSPEGCTAYVDMDTTLHEYREPHRASRPRSTTRSSKRPTKVKGRGTFVVSVNR
DSSSLNSTILDDAWAEKLACTPTTGYDSVAEEGKETVREESIEEHLTGPHPDHCLAAGRK
TTDSGVEETHASSKRPWLATQEPARNSEGAAESLCVEEEMPPWEIGDPISVAAEQKPKKA
RRVETAKSRMKTDSQKGYCLAPVKERKKKTKSSITKELAPGGAGNILSTLDSQSSIGVRT
AAKNAEVQPVANPKVLHVFTHSATAEESCETHERLSSLEVLSPDFKVSSFKPRSNHGPKP
RCRATFVIPNRFSDSTRNGKNHIVPDSLSQDDGDTNSRTSNVSLSTVETNTELPDSGEGV
RQSLRELLMDDRPPWESSVDVSCSNETGFDTPASSPERVASSAHKVAVYKESAEVMAERS
PVAERALKPLTNTNWTDDEDTGRARRRGAAISYTLPPINCKMRRGDKFSDTKYLSSPIFK
AKKKKKRQQQKDTHKPDSLENMHSVN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtcagctgagggaaggaccctcctctcaactatgttaccagggaagaaacct
atgccctcgaaggctgctaaaaataactccctaacagtggcatcgaagataaagaccaag
attctcaacacatcctcgttcttcaaggtctccctgaagactaacaacaaggctctggct
ctggccttggtggctcagagggagagaagcagacagcttgaagtggaaactgtgcaccta
cggaaacaagtggagtctctgaattttgacctggctattcgcagattcaagcacaaccaa
ctgattataatcttgaaagactttcaacgcaacactttggataacttggaaagggctgtg
gacctcttctctgatgaaaatggaagggacgttggagaatctcattttgaatgggagtcc
caccattaccacggtaacggctcccgccccttaaaggggcagctgaaggtttttgtctca
caagattcccctgaaatatctgaagaccgcaataagccaccccccgataaaaaagaggaa
aattgtcagatggagagggtagtggttcagatacctcttatcatagcagagcagtccagg
gatttggtgtccccctcaaaacagaccagcatgagccaagaggttgtagtaaatgacaga
ggaaccacgtccacaaatccttttgggacccaaagtaggtcatcagagtccaatgccagt
aaagacagcattaataagatggagcaacaagtggacaatactttgaaatcgacccaaaag
agaacatcccggcaatccagtagcctaaaagatgaggtggaaaagtggtcaaagatttat
tctgacgctggacttgaccctatcccagcagtcttgccttctgttgtctccacaactaat
attctacagccctctggtactgataaagttgtgcaccatccaaacagcttaaaggtggag
accacattggcgcatgcaataaagaccgctgtcggggaagcagagaagaccaccatcaat
gatacagagatggagataactattggggacagcgctgctgaaatcgttacagtggagacc
aagcccaagaaagctggtggaccgaagaaactgaaggtgccaaagacaaaaatcccttgt
ctattagtgaagattggaagtaagaactgtgggccaacacatgttgttgagaatctagag
gtgaagagctctgctgtaaacgtggagctgccgacagcgatacaaaaggtgttttccgca
acaccactacatacagacaaccctacagcggagggtgtggatgtcgaacaccgagaagag
aacttcatagagaactcagccagtgagatagaatcccttgttgcccgcagaaagacttat
gtcacctctcgcatcaccaaacacaaaaaacctacccgagaatcccataaaacaacacaa
gattttccaaaaacgtttgaccccagaaaaacttttggagtgcctctccaatccaaatcc
catcgaagtgtctcacctgacccgtttgaagatgacttttttgatgaccctgaagctcag
aagtctgtatttaaactagccggggcaaacccattggtcatagatgccacggagaacaaa
gtcacaaaaactaaaggtcacaagacttttgtgatttctaattttgtgatttctaatgag
cctacatctagaaagggccagaagaaatccaaagaacgcaggaagactaaagcacagcct
gtcatggtggaccatgaattacacattgaaacagaaaaggatccattccttctgcctcaa
tctctcattgaagaggagtctcattctcctgaagggtgcacagcctatgtagacatggat
accaccctgcatgaatacagggaaccacacagggcttccagacctcggtccactacacgg
agcagtaagagacccaccaaagtgaaaggcagagggacgtttgtggtctcggtgaacagg
gacagctcctcgttgaacagtacaatattagatgatgcttgggctgaaaagctggcgtgc
actccgactacagggtatgactctgttgcagaagaagggaaagaaacggtccgggaagaa
agcatagaggagcatctgactggacctcacccagatcactgtctagctgctgggcgcaag
actacagactctggggttgaagaaactcatgcctcctctaaacgtccatggcttgctacc
caggaacctgcaaggaattcagagggagctgccgaaagcttatgcgttgaggaagaaatg
cccccatgggagatcggtgaccccatttcagttgctgcagagcaaaagcccaagaaagcc
aggagagtggagacggcaaaatcaagaatgaagactgattcacagaagggttactgtctt
gcccctgtgaaggaaaggaaaaaaaagactaaaagtagcatcactaaagaattggcgcct
gggggtgcaggtaatattttgtctactctggatagccagagtagtataggtgtacgcact
gcagcaaaaaatgcagaagtacagcctgtggcgaatcccaaagttttgcacgtcttcaca
cattctgccaccgctgaggagagctgtgaaactcatgaacgtttgtcttcacttgaggtt
ctgagtccagacttcaaagtcagcagcttcaagccccggtccaaccatggccctaaaccg
agatgtagagccacttttgtcatacccaatcgttttagcgattccaccagaaacgggaag
aaccacattgttcctgactccttgtcccaggatgatggtgacacaaacagccggacatct
aatgtgtcattatcaactgttgagaccaacacagaattgcctgacagtggtgagggagta
cgtcagagcctgagggagctgctcatggacgataggcctccgtgggagtcctctgtggat
gtcagctgttcaaatgagactggatttgacactccagcctcaagccctgaaagggttgct
tcttctgctcacaaggttgctgtatataaagagtcggctgaggttatggctgaaagatct
ccagtagcagaaagagccctgaagccactaaccaacaccaactggacggatgatgaggac
acaggacgggccaggcgacggggagctgccattagctacacgttgccacccattaactgc
aaaatgagacgtggagataagttctcagacaccaagtacctgagttctcccatttttaaa
gcgaagaagaagaagaaaagacaacaacagaaggacacacataaacctgacagtttggag
aacatgcattcagttaattga
DBGET
integrated database retrieval system
