KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139400767
Entry
139400767         CDS       T10872                                 
Name
(RefSeq) telomere-associated protein RIF1
  KO
K11138  telomere-associated protein RIF1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocla03032]
    139400767
DNA replication proteins [BR:ocla03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    139400767
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 139400767
NCBI-ProteinID: XP_071001519
LinkDB
Position
3:61528221..61557706
AA seq 2571 aa
MMAMVPPTSSGFLPLLESLEDSTAGQPEQTEAYLTIANRLSGDDGTQFLPAVVKHFPRLG
KTFQTHISSQNAELSQAALQALGFCVFHVHVVSAISANFAEEILSALSSLVVKSTDKNTC
TRALWVISKQNFPTEVVAKKVPEILRALECVRTREDIQSVVMEHESLNVVISLLEQASAQ
MGEDAVQWAKLVIPLVVHSASKVRLRAAAALEMGLPLLLEKQKEVAAIVEPLMSSKLIPE
LQKLFSTKNETNVLKLWPLFVRLLGKLLHRGGPFINSLLGLEELGFRSSSPNIKKTAFIA
WKSLIDNFALNPEILCSAKRLKLLLQPLSSIQVRTEALLLTKLEVWWYLVVKLGANLPAH
FEQVGVPLLQCTLGPDSALPATPSRSSSQCSAVGTTTPKSGSPAFSGTMVPRLNLNTSVV
VAQAYPSIQLLGLEMLLHYFLGSEVTTAAAKNKLTLSLEPISHPFLSSPFSFTKHAPLLI
TAVHDSFICIGKDAPDALLSLIWKNLVSFVSTTIDAAGNKKERQGSEVLTLLLQALQSII
SSEALPANRALSLLELTVKGIPQRVLGSASYQVGKMDVLNGTPALFLILLFYNHSLVAGF
VEDERFFLCLETLVSCGLSGPTSPLAFGEAVLAAVGHSAGTLENKEQLWRMWSLVVNPLT
DTITQTNEVNQGDALEHNFSAVLTALMFPIIHLLPGKVLPQMTQKAMLGTWCRLYKVFAR
CSALVATAEENVCCEELCVKMAAILDRKALKVPATLHAVANILLVIAESADFSPYTPQFQ
QKMKSPHTHLTWVRKKSKALGNLYTFQTLLVQSLETFNALEAPETAPNGTGLALVSILSI
LFSNLSLGTAIQEALASLSHPLVALYEQAGRTPNEQRKCTSSLGAKLEKLLSDVLGCLQI
RSALAYDDELLSLLSPLLCVLFLHRRKQVRSLATQFWNATFANTLVLVYPEELKPVLSQV
KQNTPIILPGFQSVEVPDELSGQSSSESSQLETKLSGVQVTSGVKRDSLLPRAEEIKDRN
SKTSTKPVSTKLDFGSHKLPRREELEEQASIDFVFIPPETKERVLTEHQKEVKRTKRVDI
PAMYNNLDASLDTTVFTQYTQSQEESLDKLPADEQAEDAAKDEGKAEGNVERDEASEVLA
KDTQEYISPTNEMAEPAMEEEPPEEVLPESADVSMEDANEDVPLEDSDVAMESREEGTSP
IVSGGSDIISGTPKKHNSRRQSFITLEKYAEGKPASPANVVKFTGPLTRTLNSQEQEPAS
QKPSAEIEADTDRQDSQETEQVRHKSSRNESFLKEEKEHESSENRKESEVEIIAEKQSSE
TTEDDVIPDTQTQVEVLKEVPVPAVEEVMGNNSQEEEESKGLLEDYTSSQSTLSQGEPRR
SGRRRSRPLRPGEDTEERDDLDKQRKKSQPGEDVSQTDSPKTTPSLASPTDSQSQGRASR
RSKLAVEEDGGKDKLRKRSHKEVSELSQSNSQVATPSPAGDSNSLSQGWRSNKLVRESEE
LVKDKRKRRGVAKEELSQSDSLTVTASDNDSQSQSRRSQRSKLAVEVEDDGNQKQKGGRA
QKEKPSQTDSHVAKPSQLESQSQGRTSRSKAVSDSEEFDLPDKVEKQDPTEEEQSQRDSQ
MATRSPAAQTGDEQSQGISSGRSKLVTQSEEQGKDKQRRVGTENTLCQIDSKITTPSATP
KYSQSQGRASRKSKVPLEVAELEDKTSPNVATDSAAAPEMSQTDSQVTPSATRQTDSQPR
PRGRSSKRSKLEEQLKASSSPMPTPTIETHSSQVADQAGTQESPQGSRRTTRRRASQGLL
SSNVEESDTSETREDAQKPKKRGRNPKSTEALQSPLATVGSGEPVAYLEIPMDLSESSLK
SESEKSDLQNPLSEALEVKIPQDVDETIKSINSLKPVMDVLKLPLITKNNMGQREDNTEM
VDIEGECENTKLPSQLIDSSFKSDLEQLKSQHFCISPRKNLKTVSSQEGVHSDFGCEGPT
QLQNKLLTDSEQANSPVPSADGNSFSGYESVLLEPNKLCTPPISIALPTDASPSEAAEEK
LSLSLQVAESSGEKLVDVPKPVTVSSEEVTEEQMGEDKENRHPESTNNVLEEDQPEDDVF
MSIVHTQPEGFNGLDEEQQEEQYTCIKEGQPESDNTSTRTRENDTEPQANNVQDITPLQE
RAKMDTVPSLECEEEDGEETQLDNNDLALHPLDSVAPLTFDTCEAPVPLHHSSTSKDVLC
QNSPPKQKGLEAMMGLEVGQSPSSGRIRGMWTPSASPSTSILKKGQKRPIEEESSSPFTK
SRRVSFADPIQHQELADDIDRRSPIIRSSSPRAKTASSSITQPKYITTPTKGLMILSPRN
LRSPGYKSSKKCLISEMSREPRPIPKDCVYPALVSCSTPVEAVLPQITSNMWPRGFGHLV
RARNIKTVGDLSALTPSEIKNLPIRSPKISNVKTALKTYHEQQRKGRSDELKSFEEMENM
TSEPEEPTLPQNQEEEDKTPGEALATEMLDEPVSMEQGPEERLDQSRPDHQGPVGDLLLE
VESLGARLAGEELSRCSPDQLVQLHDQLGGMMKNVVVQLQSRLLSHKDSGP
NT seq 7716 nt   +upstreamnt  +downstreamnt
atgatggcgatggtgcctcctaccagctcaggtttccttcctctgctggaatctctggag
gatagcacagctggacaaccggagcagaccgaagcctacctcactattgccaatcgtctc
agtggagatgatggaacgcaattcctccctgcagtagtaaagcactttccacgtttgggt
aaaactttccagacccatatctccagtcagaatgcagagctgagccaagctgccctgcag
gccctggggttctgtgtgtttcatgtccacgttgtctctgctatctcagctaattttgca
gaggagatattgtcagcactttcctctctggtggtgaagtccacagacaagaacacatgc
acacgagcattatgggtaatttccaaacagaacttccctacagaggtggtggccaagaag
gttccagagatcctgagggccctggagtgtgtgcggacgagagaagacatccagtctgta
gttatggagcacgagtctctgaatgttgtcataagtttgttggagcaggcctcggcccag
atgggtgaggatgcagtacagtgggccaagctggtcatccccctggtggtccactctgcc
tctaaggtgcgcctgcgggcggcagcagccctggagatgggcctgcctctacttctggag
aaacagaaggaggtggctgccatcgtagaacctctcatgtcctcaaaactcatcccagag
ctccagaaactgttctccacgaagaacgagaccaacgtgctgaaactctggccgttgttt
gtcaggctcctggggaagctgctccatagaggtggtcccttcatcaactccctgcttggc
ctggaggaactgggcttccgtagctcctccccaaacatcaagaagaccgccttcattgct
tggaagagcctgattgacaatttcgcgctcaacccagagatcctgtgcagtgccaagcgt
ctaaagttgctgctgcagcccctcagctccatccaggtgaggactgaggccctgctgctc
accaagctggaggtctggtggtacctggtggtcaaactgggagccaacctgcccgcacat
tttgaacaggttggtgttcctctcctccagtgcaccctgggcccagactcggccctgcca
gccactccttccaggagctccagccagtgcagtgctgtggggaccactactcctaaatct
ggttccccagcgttctctggcactatggtgccccgtctgaacctaaacaccagtgtggtg
gtggcccaagcctacccctccatccagctgctgggactagagatgttgttgcactacttc
ctggggtcagaagtcacaaccgccgcagccaagaacaagctgacgctcagcctggaacct
atttctcaccccttcctgtccagccccttctccttcaccaagcacgcccctctgctgatc
actgctgtgcacgacagcttcatctgcatcggcaaagacgccccagacgccttgctttcc
cttatatggaagaacctcgtcagtttcgtaagcacaacgattgatgctgcaggcaataag
aaggaaaggcaaggctctgaggtgctgaccttgctgctacaggctctacagagcatcatc
tcctcagaggccctccctgcaaacagggctctgagtctgctggaattgacagtgaagggt
atccctcagagagtactgggatctgcctcttaccaagtgggcaaaatggatgtactgaat
ggaaccccagctctgttcttgattctcctgttctacaaccacagtctggtggcaggcttc
gtagaggatgagaggttcttcctgtgtttggagacactggtgagctgtggtctgtccggc
cccacgtcccccctggcatttggggaggcggtcctggcggcggttgggcacagcgcgggg
actctggagaacaaagaacagctttggaggatgtggagcctggtggtcaacccgctgact
gacaccatcacacagaccaatgaggtgaaccaaggggatgctctggagcacaacttcagt
gctgtgctcactgccctgatgttccccatcatacacctgctacctggcaaggttctgcca
cagatgactcagaaggccatgctgggtacgtggtgcaggctgtataaggtgtttgcccgc
tgctctgccctggtggccaccgccgaggagaacgtctgctgtgaggagctgtgtgtcaag
atggctgccatattggacagaaaggctctgaaggttccagcaacgttgcatgcggttgct
aacatcctcctggtcatcgctgagagtgcagacttctctccctacacaccacagttccag
cagaagatgaaatctccccacacccatctaacctgggtgcgtaagaaaagcaaggcgctg
gggaacctgtataccttccagaccctgctggttcaatcccttgagaccttcaatgcactg
gaggcccctgagacggcccctaatggtacaggcctagccctggtctccatcctctcaatc
ttgttctctaatctgtctctgggtacagccatccaggaggccctggcctctctctcacat
cccctcgtagccctctatgaacaggctgggaggactccaaatgagcagcgcaaatgtacc
tcaagtcttggagcaaagctggagaagctcctgagtgatgtcttggggtgcctgcagatc
cgttcagccctggcctatgatgatgagctgctctccctgctgtcccccttgctctgtgtc
ctgttcctccatcggcgcaagcaggtccgctccttagctacacagttctggaatgcaacc
ttcgccaacactctggtcctcgtctatccagaggaactcaagccggtgttgagccaggtg
aagcagaacactcctatcattctacctggatttcagtctgttgaagttccagatgaactc
agtggacagtcctcgagtgagagctctcagctggagaccaaactgagtggagtacaggtc
acttctggggtgaagagggactctctactgcccagggctgaggagataaaggacaggaac
tccaagacctctaccaagcccgtctctacaaaacttgattttggttctcacaagctgcct
cgtagagaggaactggaggagcaggcctcgatagactttgtgttcatcccccctgagacc
aaggagagagttctcactgagcaccagaaagaggtcaagagaaccaaaagggttgacatc
cctgccatgtacaacaacctggatgcttcccttgataccacagtcttcacccagtacaca
cagagtcaggaggaatcactggacaaattaccagcagatgagcaagccgaagatgcagct
aaagatgagggtaaagcagagggtaacgtggaacgggatgaagcttctgaggttttggca
aaagacacccaggaatatatcagtccaaccaatgagatggcagaaccggcaatggaagag
gagcctcctgaggaagtacttcctgagtctgcagacgtttccatggaggatgccaacgaa
gatgttccattggaggactccgatgttgccatggagtctagagaagagggcaccagccca
attgtttctggcggctctgatatcatctcggggacacctaagaaacacaacagtcgtcgc
cagtccttcatcactctggagaagtatgctgaggggaagcctgctagtcctgccaacgtg
gtgaagtttacaggccccctcaccaggaccttgaacagccaggagcaggagcctgcctct
cagaaaccatcggcagagattgaggctgacacagatcgacaggactcccaggagactgaa
caagtaagacacaaaagctccaggaacgagtctttcctaaaggaggaaaaggaacacgaa
tcttcagaaaacagaaaggaatctgaagttgagataatcgctgagaaacagtcaagtgaa
accacagaggacgatgtcatcccagacacccagactcaggtggaagtactgaaggaagtt
ccagttcctgcagttgaagaagtaatgggaaacaacagtcaggaagaagaggaatctaaa
ggtcttttggaagattataccagctcccagtccactctgagccaaggtgaaccaaggcgg
tccggacggcggaggagtaggccgctgagaccaggagaggacacagaggaacgagatgat
ctagacaaacagaggaagaagtctcaacctggagaggatgtgagtcaaactgattcacca
aagactactccctctcttgccagtccaactgatagtcagtcacaaggtagagccagtagg
agaagtaagctggctgttgaggaggatggtggaaaagacaagctgagaaagagaagtcac
aaggaagtgagtgaattgagtcaatcaaattcacaggttgccacaccttcacctgctggt
gatagcaacagcctatcacagggttggaggagcaacaaattggtcagggaatcagaagag
ctggtaaaagacaaacggaagaggagaggtgttgcaaaggaagagctcagtcaaagtgac
tccctaacggtcactgcctctgataatgatagccaatcacagagtagacgtagtcagagg
agtaagctggctgtggaagtagaggatgatggcaatcagaaacaaaagggtggtagggct
cagaaggagaagccaagtcaaacagattcacatgtagccaaaccatctcaactagagagt
cagtcccagggtagaacaagcaggagcaaggccgtcagtgattcggaggagttcgatctc
ccagacaaggttgaaaagcaggatcctactgaggaggagcaaagccaacgtgattctcag
atggccacacgatctcctgctgctcaaacaggagatgaacaatcacagggtatatcaagc
gggaggagtaaattggtcacacagtccgaagaacagggtaaagacaaacagagaagagtt
ggcacggaaaacacactctgtcaaattgactcaaagatcaccacaccttcagccactcca
aaatatagccagtcacagggtagagcgagcaggaaaagcaaggtgccccttgaagtggct
gagttggaggacaaaacaagtccaaatgtggccactgattcagcagcagcacccgagatg
agccagactgattctcaggtcactccttccgccaccagacaaacagacagccagccgagg
cccagaggcagatccagtaagagaagcaagttagaggaacagttgaaggccagcagcagc
cctatgccaacccctaccatagagactcatagctcccaggtggcagaccaggctggaaca
caggaatccccccaaggaagcagaaggactacgagacggagagcttctcagggcttactg
tcctccaacgtggaggagtcagacacttcagagacccgggaggatgcccagaaacccaag
aagagaggcaggaatcccaaatccaccgaagctcttcaaagcccacttgctactgttgga
tcaggagagccagtggcttacctagagatcccaatggatctttctgaatcttctctaaag
tctgaatctgaaaagtcagacttgcaaaacccattgagtgaggccttagaagttaagatt
cctcaggatgtggatgaaaccattaaaagtatcaactcccttaaacctgttatggatgtt
ctgaaacttcctctgataacaaagaacaatatggggcaaagggaggataacactgagatg
gtagatatagagggtgagtgtgagaataccaagctgccttctcaattgatcgactcttcg
ttcaaatctgatctagaacaacttaagagtcagcatttttgcatatccccacggaagaac
ctcaaaacagtctcttctcaggagggtgttcatagtgactttgggtgtgaagggccaaca
cagctccaaaataagctcctcactgactctgagcaggccaactctccagtgccttccgct
gatggaaattcattctcaggatatgaaagtgtattacttgaaccaaacaaactatgcacc
cctcccatctccattgctctccccacagatgcttcacccagcgaagctgcagaggagaaa
ctgagccttagtcttcaggttgctgagtcttcaggggagaagcttgtagatgtgccgaag
cctgtgactgtgtccagtgaggaggtgacagaggagcagatgggagaagacaaggagaac
cgacatccagagtctactaacaatgttctagaggaggaccaaccagaagatgatgttttc
atgtctattgtgcatacccaaccagagggtttcaatggcttagatgaggagcaacaggag
gagcagtacacatgtattaaagaaggccagccagaatctgacaacacctctactaggacc
agagaaaatgacacagagcctcaggcaaacaacgttcaagatatcactcctctccaagag
agggcaaaaatggatacggttccaagtcttgagtgtgaagaagaggacggtgaagaaact
cagctagacaataatgacctagctttacatcctctagactctgttgcccctctgaccttc
gacacttgcgaagcaccagtgcctctacatcattcaagtacttctaaagacgtgttgtgc
caaaactcgcctcccaagcagaagggtttggaggctatgatgggtttggaggtgggccag
agccccagcagtggcaggattaggggaatgtggactccctcagcctccccctccacctct
atactgaagaagggacagaaaaggccaatagaagaggagagttcttcacctttcactaag
tctcgacgagtatcatttgccgacccaatccaacaccaggagctggcagatgacattgac
cgtcgcagccctatcatccgatccagctccccaagagccaaaactgccagcagtagcatc
actcagcctaagtacatcacaacaccaacaaagggcctaatgatccttagtccacgcaat
ctccgcagcccggggtacaagagctccaagaaatgcctgatctcagagatgagccgggag
ccgaggcccatccctaaggactgtgtgtacccggccctggtcagctgttctacgcctgtg
gaggcggtactgcctcagatcacctccaacatgtggcctcgtggttttggtcatcttgtg
cgtgcccgtaatatcaaaacggttggagacctcagtgctctcacacccagcgaaatcaag
aaccttcccattcgctccccaaagatctctaatgtgaagacagcacttaaaacataccac
gaacagcagcggaagggccgtagtgatgagttgaagagttttgaagagatggagaacatg
acatcagagccggaggagccaacccttcctcagaaccaggaagaggaggacaagactcct
ggagaggccctcgccacagagatgttggatgagccagtgtccatggagcagggtccagag
gagaggctggaccagagcaggcctgaccaccaggggcctgtgggggatcttctgttagag
gtggagtccctgggagctcgtctagctggggaggaactgagccgctgctcccctgaccag
cttgttcagctccatgatcagctgggagggatgatgaagaacgtagtggtgcagctgcag
agcagactactttctcacaaggacagcggaccctga

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