Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139401017
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Entry
139401017 CDS
T10872
Name
(RefSeq) general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139401017
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
139401017
TFIIIC, fungi type
139401017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_14
TPR_2
TPR_19
TPR_6
TPR_12
TPR_10
TPR_1
ANAPC3
PknG_TPR
CobT
TPR_9
DUF4746
Motif
Other DBs
NCBI-GeneID:
139401017
NCBI-ProteinID:
XP_071001643
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MCVCSLSRSYYESSDLPSAMGVMEEALRRHPELVTDESINMAAELYIANHQHDKALQVLV
QFCGIVLERGEPKPDLVEEQEKMESEEQEKMEAEENPEEKMEAEENPEEKKKMEAEEEEE
QKKMEAEEEEEQKKMEAEEENPEKEKEMKTATTEEPGETGGEVREVVVPDHVPVDIRVKL
MVCLIHQHVYRPLDSMLTSLMEQSPEELGDLYLDVAEAFLDQGEYNSALPLLSALVCSER
YNLAVVWLRHAECLKALGHMEVAVKSYNKVVQMAPLHLEARLCLSTLQQQLGRPLCALKA
LEPMYDPDTLAQDASAAQQELKLLLHRSTLLRSQGRLDDYLDTMLTMLAMLLKVAMTRAQ
VCVKASMWAGVRHLRLVKVSKDLVSDIHDQEAAYQDISGKTSVLSREDWWLLLVRCVCTL
CEMKRFKEAELLVDSSLEFYSFYDVKVKRKELEFFGLSAAFLDHNYRKAYDYIRLTLMEK
QEWPMLWNVFNQVTLHSQDVRHHRFCLRLMMKNPDNHALCVLSGHNALVSGSFKHALGQY
VQAFRSKPDEPLYSLCVGLTFFHMASQKFVVKRHPLILQGFSFLWRYVEQRGPCQESMYN
LGRALQQMGLAHLAIHYYHKALSFPPLTLEGIADDQVDLRREIAFNLSIIYQASGNTEMV
RHLINTYCTV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgctctctctccagaagctactatgagagtagtgacctgccgtcagccatg
ggggtgatggaggaggccctgaggagacacccagagctggtgacagacgagagcatcaac
atggctgctgagctctacatcgccaaccaccaacacgacaaggcccttcaggttctagtc
cagttctgcgggatcgtcctggagagaggagaacctaagccagaccttgtggaggagcag
gagaagatggaatcagaggagcaggagaagatggaagcagaggagaacccagaggagaag
atggaagcagaggagaacccagaagagaagaagaagatggaagcagaggaggaagaggag
cagaagaagatggaagcagaggaggaagaggagcagaagaagatggaagcagaggaggag
aacccagagaaagaaaaggagatgaaaacagcgacaacagaagagcctggtgagactgga
ggggaggttagagaggtggtagttccagaccatgtaccagtggacatcagagtgaaacta
atggtctgtctgatccaccagcatgtttacagacctctggattccatgttgacgtctctg
atggagcagagcccagaggagctgggggatctgtacctggacgtggctgaggccttcctg
gaccagggagagtacaactcagccctgcctctcctctctgccctggtctgctctgagaga
tacaacctggctgttgtctggctccgacacgctgagtgtctgaaggcgctgggccacatg
gaggtagcagtgaagagttacaacaaggtagtacagatggctcctcttcatctggaggcc
aggctgtgtctgtctactctgcagcagcagctgggtcgacctctctgtgccctcaaggcc
ctggagcccatgtacgacccagacacactggcacaggacgcctccgcagcacagcaggag
ttgaagctgttgctacaccgctctactctcctgcgttcccaaggccgactggatgactac
ctggataccatgctgaccatgctggctatgctgctgaaggtggctatgacgcgggcccag
gtgtgtgtcaaagccagcatgtgggcgggggtcagacacctgcgtctggtcaaggtgtct
aaggacctggtgtcagacatccacgaccaggaggcagcctaccaggacatcagtggtaag
accagtgtgttgtctcgtgaggactggtggttgctgttggtgaggtgtgtgtgtaccctg
tgtgagatgaagcgttttaaagaggcagagctgctggtagactcttctctggagttctac
tccttctatgatgtcaaggtgaagaggaaagagctggagttctttggtctgtcggctgct
ttcctggaccataactaccgcaaggcctacgattacatcagactgacgctgatggagaag
caggagtggcccatgctgtggaatgtattcaaccaggtgacccttcactcccaggacgtg
cgtcatcatcggttctgtctgcgtctgatgatgaagaacccagacaaccacgccctgtgt
gttctcagtggacacaatgcactggtgtctggcagcttcaaacacgcactcggtcagtat
gttcaggcgttcaggtctaagccagatgaacctctgtacagtctgtgtgttggcctcacc
ttcttccacatggcgtctcagaagtttgtggttaaacgccacccgctaatactgcaggga
ttctcattcctgtggcgttacgtggagcagcgtgggccctgccaggagagcatgtacaac
ctgggacgggccctgcagcagatgggcctggcacacctcgccattcactattaccacaag
gctctcagcttccctcctcttacactagagggtattgcggatgaccaggtagacctgcgt
agagagatagccttcaacctgtcaatcatctaccaggccagtggaaacactgagatggta
cggcacctcatcaacacatactgcactgtataa
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