Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139401782
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Entry
139401782 CDS
T10872
Name
(RefSeq) unconventional myosin-XVIIIa-like isoform X1
KO
K10362
myosin XVIII
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139401782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139401782
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139401782
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Others
Others
139401782
Others
Actin-binding proteins
Myosins
139401782
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139401782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
SH3_Myosin-XVIIIa
PUMA_CC
IQ
nSTAND3
ACBP4_C
AAA_22
ABC_tran
AAA_19
NPHP3_N
RsgA_GTPase
SRP54
AAA_16
PduV-EutP
AAA_18
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
139401782
NCBI-ProteinID:
XP_071001853
LinkDB
All DBs
Position
Unknown
AA seq
1528 aa
AA seq
DB search
MANLMVRGRTRNRPRTRMDEPSEKEQEEAVKREKKEGPKLVEIKSISNVGPVSKQEDKTP
VSAVPAKVHPMASNLISVSSRSSPAGFIPAPKPSPLSPPAGFTPLPNSASLSPPAGFVPA
PKSSPLCQPNGYVPAPKSATLSPPVGFVPAPKSATLSPPVGFVPAPKSATLSPPVGYVPA
PKSTAVSPSVSTAAPKSSPAIPTSCFIPPLKSAPISPPAGLISASKYTPLSPPAGFIPSS
KYSPVTPPSASFPTSKSSPSTPPAGFVPVSKVSPLSPTPPKVLPLSPPPAFIIPKASALS
PPPALIPPPKLPTVKKLEVVASPLSSVPIEKASPQNKSSTVSSKNTPTITQKEAPLSPTE
EAQRLLDRIFSAPLEPAVCASAPTLCPAPAPNPPQGQVDKDPVAILQVSHAAAQQPKVKT
EEQIAAEQAWYGSEKVWLVHKDGFSLATLLKTEAGSLPEGKVKVKLEHDGTVLDVDDDDV
EKANPPSFDRSEDLALLQYLNESSVMHSLRQRYGGNLIHTHAGPNTVIINPLSAPSMYSE
KVMHMFKGCRREDTAPHIYAVAQSAYRNLLTTRQDQSIVLLGKSGSGKTTNCQHLVQYLV
SIAGSTGKIFSGEKWQAVYTILEAFGNSSTSMNTNASRFSQIVSLDFDQAGQVASASIQT
MLLEKLRVTKRPETESTFNVFYYMMSGADSTLRTELHFNHFAENSAFGIVPQSKLEDKQK
SSQQFTKLQAAMKVLGISVEEQRALWLILGTIYHLGAAGATKAGRKQFARHEWAQKAAYL
LGCTLEELSSSIFKHQVKGALQRSTSFRGGPDEAGAGDSSVSKITALECLEAMASGLYSE
LFTLVISLVNRALKSSQHSLCSLLIVDTPGFQNPRMAKRQRGATFEELCHNYAQERLQTL
FHERTFVQELERYKEENIELALDEIGSSTSMSVAAIDQASTQALVRTLARTDEARGLLWL
MEEEAVQPGGSEDTLLERLFSYYGPDQGDNKGHALLLKSDKPHHFLLGHSHGTDWVEYDA
QGWLNHAKQNPASQNAATLLQDSQKKNISSLFSSRSGGPTVLSGSIAGLEGGSQLALRRA
TSMRKTFTTGMAAVKKKSLCIQIKLQVDALLDTVRRSRVHFVHCLLPKADTVGVGMEPRV
THGESCDSGLMQLDVGLLRAQLRGSKLIDALRIYRQGYPDHMVFSEFRRRFDVLVPHLTK
KHGRNYMVTDEKRAVEELLESLDLENSSYHMGLSRVFFRAGTLAKLEEQRDVQTRRNITM
FQASCRGYLARQAFKKRKIQDLAIRCIQKNIKKNKGVKGWAWWKVFTTVRPLIEVQLTEE
QIRGKDEEIQQLKGRLEKVDKERNELRLNSDRLESRITELSSELADERNTGESASQLLES
ETSERLRLEKDMKDLQTKFDSMKKSMESMEMEVMETRLLRASELNGEMDDDDTEGEWRLK
YDRAIREIEFTKKRLQQEFNDKLEVEQQNKRQLERGLSDLQADSEEVQRTAQQLKKKCQR
LTAELQDTKLHLEGQQSRNHDLEKKQRK
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctcatggtccgcgggaggaccaggaaccgccctcgcacacgcatggatgag
ccgtctgaaaaagaacaagaggaagcagtgaaaagagagaaaaaagaaggccctaaattg
gttgagattaaatctatctctaatgtcggcccagtttcaaaacaggaggataagactcct
gtgtcggctgtacctgctaaagttcatcctatggcttctaatttgatctcggtttcctcc
aggtcttcccccgcaggcttcatccctgccccaaagccttccccgctctcccctcctgca
ggtttcaccccactaccaaactcagcctccctttccccacctgctgggtttgtaccagca
ccaaaatcatcccccctttgccaaccaaatgggtatgtaccagcaccaaaatcagccacc
ctttcccctccagtagggtttgtaccagcaccaaaatcagccaccctttcccctccagta
gggtttgtaccagcaccaaaatcagccaccctttcccctccagtagggtatgtaccagca
ccaaaatctactgctgttagtccttcagtttccactgcagcccccaaatcctccccagcc
attcccacatcatgctttatcccaccactaaaatcagcccccatttccccacctgccggg
ttaatatcagcatcaaaatatacccccctttccccacctgctggttttatcccctcttct
aaatactcccctgtcactcccccttcagcatcctttcccacctctaagtcctcccccagt
actcctcctgcagggttcgtcccagtctccaaggtctcgcctctctcccctactcctcca
aaggtcttgcctctctcccctcctcccgcctttatcattcccaaggcgagtgccctctct
ccaccaccggcgttgatcccgccccccaaactgccaaccgtgaagaagcttgaggtggta
gcctctcccctgtcctctgttcctattgagaaggcttcaccgcagaacaagtcatcaacc
gtttcatcaaagaataccccaaccataacccaaaaggaggcgccgctcagtcccactgaa
gaggctcagagactcctggacaggatcttcagtgcgcctctggagccggcagtttgtgcc
tcggccccgaccctttgtcctgccccagccccaaacccccctcagggacaggtagacaag
gatcccgtggccatccttcaggtgtctcacgccgctgcccaacaacccaaggtgaagaca
gaggagcagatagccgcagagcaggcatggtacggctcagagaaggtctggctggttcac
aaggatggcttctccctggcgacgctgctgaagacggaggcaggttctctgccggagggg
aaggtgaaggtcaaactggaacatgacgggacagtactggacgtagatgacgatgacgtg
gagaaggcgaaccccccgtcgtttgaccgctctgaggacctggccttgctgcagtacctc
aatgagtccagtgtgatgcactccctgcggcagcgctacgggggaaacctcatccacaca
cacgccgggcccaacacggtcatcatcaatcccctcagcgctccctccatgtactccgag
aaggtgatgcacatgtttaagggttgcaggcgagaggacacggcacctcacatctacgcg
gtggctcagtcggcctacaggaacctgttgaccacgcgtcaggaccagtccatcgtgctg
ctggggaagagcggcagcggcaagaccaccaactgtcaacacctggtccagtacctggtc
tccatcgctggcagcaccggaaagatcttctctggggagaagtggcaggcagtatacact
atcctggaagcatttggaaacagctccacctccatgaacaccaatgctagccgcttctct
cagattgtctctctggacttcgaccaggctggccaggtggcctccgcatccatacagacc
atgctgcttgagaagctgagagtgaccaaacggccagagactgagtccaccttcaacgtg
ttctactacatgatgtccggagctgacagcactctcagaacggagctgcactttaaccac
tttgcagagaacagcgccttcggaattgtgcctcagtctaaactggaggacaaacagaag
tcgtctcagcagttcaccaagctgcaggcagccatgaaggtgctgggcatctcagtggag
gagcagagggctctgtggctcatcctggggaccatctaccacctgggggccgcaggggcc
accaaagctggccgtaagcagtttgcccgtcatgagtgggcccagaaggctgcctacctg
ctgggctgcaccctggaggagctctcctcgtccatcttcaagcaccaggtcaagggtgcc
ctgcagaggtccacctccttccgtggggggcccgacgaggccggggcaggagacagctca
gtctctaagatcacagccctagaatgtctggaggccatggcttcaggcctgtactcagag
ctcttcaccctcgttatctccctcgttaacagagctctgaagtccagtcagcactctctg
tgctctctgctcatcgtggacacaccgggtttccagaaccctcgcatggccaagcgccag
cgcggtgccacctttgaggagctgtgccacaactacgcccaggagcgcctgcagaccttg
ttccacgaacgcacctttgtacaggagctggaaagatataaggaggaaaacatagagctt
gcattagatgaaatagggtccagtacctcaatgtcggtagcagctatagaccaagcatca
acccaagcgctggtgcgcaccctggcgaggacagatgaggctcgaggtctgctgtggctg
atggaggaggaggctgtgcagccagggggctctgaggacactctgctggagagactcttc
agctactatggccctgaccagggggacaacaagggacacgccctgctcctgaaaagtgac
aagccgcatcacttcctgttgggccacagccacgggacagactgggtggagtacgatgct
cagggttggctgaaccacgccaagcagaaccccgcctcccagaacgctgccactctgctg
caggactcgcagaagaagaacatcagcagtctgttctctagtcgtagtggagggcccaca
gtgctgtctggctccatcgcagggctggaggggggatctcagctggccctccgcagagcc
actagcatgaggaagaccttcaccactggcatggccgctgtcaagaagaagagcctctgt
atccagatcaaactgcaagtggatgctctgctggacacggtgcgcaggtccagggttcac
tttgtccactgcctgctgcccaaggcagacacggtgggagttggcatggagccgcgcgtg
acccatggagagagctgcgactcaggcctcatgcagctggatgtgggcctcctgagggct
caactccgtggatctaagcttatcgacgccttgcgcatctacagacaaggataccctgat
cacatggtcttctccgagttcagacggcgctttgacgtgctggtgccccacctgaccaaa
aagcacggacgcaactacatggtcacagacgagaagagggctgtggaggagctgttggag
tctctggacttggagaacagcagttaccacatgggcctgagcagggtgttcttcagagcg
gggaccctggccaaactggaggagcagagagatgtccagaccagacgcaacatcaccatg
ttccaggcttcctgcagaggatacctggccagacaggctttcaagaagaggaagatccag
gacctggctatccgctgcatccagaagaacatcaagaagaacaagggcgtgaagggctgg
gcctggtggaaggtgttcaccacagtacgcccccttatagaggtccagctcacagaggag
cagatacgtggcaaagacgaggagatccagcagctgaaagggaggctggagaaggtggac
aaggagaggaacgagctgagactcaacagtgaccgcctggagagcaggatcacagagctg
tcgtcggagctggcagacgagaggaacacaggagagtcggcctctcagctgctggagtct
gagacctcagagagactgagactggagaaagacatgaaggacctgcagactaagtttgac
tcgatgaagaagtctatggaatctatggagatggaggtgatggagaccagactcctcaga
gcctctgagctcaatggagagatggacgatgacgacacagagggggagtggagactgaag
tatgacagggccatcagagagatagagttcaccaagaagaggttacagcaggagtttaat
gacaagctggaggtggagcagcagaacaagcggcagctggagagggggctaagtgacctc
caggcagacagtgaggaggtgcagcgtacggcccagcagctgaagaagaagtgtcagaga
ttgacggctgagctacaggacaccaagctacacctggagggccagcagagccgcaaccat
gacctggagaagaaacagaggaagtga
DBGET
integrated database retrieval system
