KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139401793
Entry
139401793         CDS       T10872                                 
Name
(RefSeq) protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    139401793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139401793
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocla02044]
    139401793
Membrane trafficking [BR:ocla04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    139401793
Secretion system [BR:ocla02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   139401793
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40 Beta-prop_TEP1_2nd WDR55 TPR_Sec16 Beta-prop_EML EIF3I Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd MIOS_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 Prp18 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 139401793
NCBI-ProteinID: XP_071001866
LinkDB
Position
Unknown
AA seq 1273 aa
MRLKEIQRTAHPAWSPAPHHPICLALGTSAQQLDASFNTTAALEIFQVDFADPSLGMKLK
GSLPTSNRLHSLVWVNFGAGEDGLGGRLIGGSDNGMVTVYSPEAIVTSGAEAIIGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGTKSQPPEDISVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRMPVI
QMWDLRFATSPLKVLENHTRGLLSIAWSQADPELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDIQWCPRNPALLSAASFDGWISVYSVMGGSLEAQQQSRADQISSSFDTMDPFGT
GQVLPPLQVPQPTPQTTLVAPLKKPPKWVRRPVGASFAFGGKLITFESPKAPVQSPQPVP
VPRQVFVSQVTTETELLQRSRELQAALQSGSLSDYCQAKIHKAPTDSEQDIWRFLLVNFE
DEARVKFLRLLGFSKEDLERKISTCLGKNLQPNGHGVDANDLAEKIQLLSTQRSEESGDE
VDSTKTPGSSSPSDFFSQIPPQPQDKEKKISFPIPVSADADGLISQALLVGNFEGAVDLC
LNEGRYAEAILLAISGGQELLQKTQQTYLEKQRNSISMLISSVVTQNWGDIVQSCALDNW
KEALAALLTYAHPKEFAHLCETLGSRLEGERTEKRCLQACLCYICSGNIEKLVECWALQR
DCSSPLVLEDLVEKMMVLRKSVECLRNSEVAVQSPVLADKLTHYAGLLASQGSLATALSY
LPDTSDQACIMMMRDRLFHAQGEGGAAGGQQPPPCPYNRVRVTGGNPTPAQAPAVPVQTQ
PPTQTGPYQPPLPVMSVGGQPPPPVMSVVGQPPMTTVFTPQAAALSRGPPPPSYGGLPPS
SPAPPPSGLPRTGLRPAYPQHPATAPGFSPLQPFQPQQQPMSAGLGGPGLSAFPPGPPGP
AIHPLPPFSAPGGLPTMPSPGPPPSGFTPTSLPSGPMPLSYQQPGAPVGMYPPGGSHLHS
QGPPAGPPSGPYPPLGPGYPQGGPGAPAVKSFSAPSVAPPPTGYFPWLSTPLVDDDEGQD
GWNDPPAVRGGSRKKKVVPDNYTPPAPITAPVMGGFPMEGHHHQPQGQQGHDPSRTQQFP
PGAPQEPSVQLLQALPAERVEQREIPAEHMVLKQTFDSLVQRCQLAAQDPQTKRKLDDAS
KRLGYLYDKLREHSLSNNILGGLHEISRCVAGQNYQRGLEVHTAVVTSSNFSEIQAFMPI
LKVVMTIANKLGV
NT seq 3822 nt   +upstreamnt  +downstreamnt
atgaggctgaaagagatccagaggactgctcatccagcatggagtcctgcgccccaccac
cctatctgcctggctttaggcacgtcagctcagcagctggatgcgtcattcaacaccact
gccgccttggaaatattccaggtggattttgccgatccttccctgggaatgaagctcaag
gggtccctacctacttctaacaggctccatagtctggtgtgggtgaactttggagcagga
gaagacggtttgggagggagactgattggaggcagtgataatggcatggtaacggtgtat
agcccagaagccatcgtaacatcaggggcagaggcaataataggacagtctgacaaacac
actgggcctgtcagagcactagacttcaacccctttcagagtaatctgttggcatcaggt
gcaaacgattcagagatctacatctgggatttgaacaatttcagcaatccaatgacaccc
gggacaaagtcacagcctcctgaagatatcagtgtagtgtcgtggaacagacaggtgcaa
cacatcctggcctctgcaaaccccagtgggaaagcagtggtctgggacctgaggaagaac
gagcccatcatcaagattagtgaccacagcaaccggatgcactgttcagggatgctctgg
caccccgaggtggccacacagttggtcctggcctcagaagatgaccgcatgccagtcatt
cagatgtgggacctgcgctttgccacgtcccctctcaaagtcctggagaaccacacaagg
ggacttctgtccatagcgtggagccaagcagacccagagctgttgctcagtagtgctaaa
gacaacaggatcctctgctggaacccaaacactggagaggtgatctatgaattaccaacg
accaatcagtggtgctttgacatccagtggtgtcccaggaacccagcgctgctgtcggcg
gcctcgtttgacggctggatcagtgtttacagcgtgatgggaggaagcctggaggcccag
cagcagagcagggctgatcagatctcctcgtcctttgacaccatggatccgtttgggaca
ggccaggtgctgccccctctgcaagttccccaacccacccctcagaccaccctcgtcgct
ccgctgaagaagccccccaagtgggttcgtaggcccgtaggagcctcattcgcttttggt
gggaagctgatcacctttgagagtcctaaggctccagtccagagcccacagcccgtccct
gtccccaggcaggtgtttgtgagccaggtcaccacggaaacagagctcctccaacgttcc
agagagctgcaggctgctctgcaatctggatccttgtcagactactgccaggccaagatc
cacaaggcccccacagactctgaacaggatatatggaggtttctcctggtcaactttgaa
gatgaagcccgggtcaaattcctgagacttttgggtttcagcaaagaggatttagagaga
aagatatccacctgcttggggaagaatctgcagcctaacggacacggagtggatgccaac
gatctggctgagaagatacagcttctctctactcagaggtcagaagaatccggggatgag
gttgactccaccaagactccgggttcatcctcgccctctgactttttcagtcagatccca
ccacaaccacaagacaaggagaagaagatcagcttcccaatccctgtctcagcagatgca
gatggtctgatcagccaggctctgctggtgggaaactttgagggagcggtggacctgtgt
ctgaacgaggggcgctacgctgaggccatcctgctggcgatcagtggaggacaggagcta
ctgcagaagacccagcagacatacctggagaagcagaggaacagcatctctatgctgatc
tcatccgtggtgacccagaactggggagacatcgtgcagagctgtgccttggataactgg
aaggaggctctcgctgcactcctaacctacgctcaccccaaagagtttgctcatctgtgt
gagaccctggggtcgcgtctggagggggagaggacagagaaacgctgtctgcaggcatgt
ctctgttacatttgctctgggaacattgagaaactagtggaatgctgggccctgcagagg
gactgctcatctcccctggttttagaggacttggtagagaagatgatggttctgcgtaag
tctgtggagtgtctgaggaacagcgaggtggctgtacagagtcctgtcctggctgacaag
ctgactcactacgctggtctcctagcttcacaaggcagcctggctacagccctgtcctac
ctgccagacacctcagaccaggcttgcatcatgatgatgagagaccggctgttccacgcc
cagggagagggaggagctgcaggggggcaacagcccccaccgtgcccttacaacagagtc
agggtgactgggggcaaccctacccccgctcaggcccctgctgtccccgtccaaacacaa
ccaccaacacagacggggccctaccagcctcctcttcctgtgatgtcagtgggtggccag
cctcctcctcctgtgatgtcagtggttggccagcctcctatgacgacagtcttcactcct
caggctgctgctctctccagagggccgcctcctccttcgtatggcggtctgccaccctcc
tcccctgctcctccaccgagtgggctgccacgtacaggactacggccagcctaccctcaa
catcctgccactgccccagggttctctccactccagccattccagccacaacagcagccc
atgtctgcaggactaggtggccccggcctctctgcctttcctccaggacctccaggacct
gctatacaccccctgcctccgttctctgcccctggcggcctccccaccatgcccagccca
gggccacctccgtcaggcttcacccccacctcgctcccttcaggccccatgccactcagc
taccagcaacctggggcccccgtcggcatgtacccaccaggggggtctcaccttcacagc
cagggcccacctgcaggtcccccctctggtccgtacccacccctgggacctgggtaccca
caaggaggtcctggagccccggctgtcaagtccttctctgctccgtcggttgctcctcct
cctacagggtacttcccttggctgagtactccccttgttgacgatgatgaaggacaagat
ggctggaatgacccaccagcagtacgagggggttctaggaagaaaaaggttgtcccagac
aactacacccctccggctcccatcaccgcccctgttatggggggtttccccatggagggc
catcatcatcagccccaaggacagcagggccacgaccccagccgcacgcagcagttcccc
ccaggggcccctcaggagcccagcgtacagctcctccaggcgctgccggctgagagggtg
gagcagagagagatccctgcagagcacatggtcctcaagcagaccttcgacagcctggtt
caacgctgccagctagccgcacaagacccacagacaaagaggaaacttgacgatgcatcg
aaacgccttgggtacctgtatgacaagctgagagagcattcgctgtctaacaacatcctg
gggggtttacatgagatcagccgctgtgtggcgggccagaactaccagcgtggcctggag
gtccacactgctgtggtcaccagcagcaacttcagcgagatccaagccttcatgcccatc
ctcaaagtggtcatgaccatcgccaacaagctgggcgtctga

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