Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139401901
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Entry
139401901 CDS
T10872
Name
(RefSeq) rab11 family-interacting protein 4-like
KO
K12485
Rab11 family-interacting protein 3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139401901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139401901
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139401901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
139401901
NCBI-ProteinID:
XP_071002008
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MDRETFPTPLHYRQPVPGRMDRETFPTPLHYRQPVPGRMDRETSPTPLHYRQPVPGRMDR
ETFPTPLHYRQPVPGRMDRETLPTPLHYRQPVPGRMDRETLPTPLHYRQPVPGRMDRETL
PTPLHYRQPVPGKMDRETFPTPLHYRQPVPGRMDRETLPTPLHYRQPVPGRMDRETLPTP
LHYRQPVPGRMDRETLPTPLHYRQPVPGRMDRETFPTPLHYRQPVPGRMDRETLPTPLHY
RQPVPSRMDRETFPTPLHYRQPVPGRMDRETFPTPLHYRQPVPGRMDRETFPTPLHYRQP
VPGRMDRETLPTPLHYRQPVPGRMDRETSPTPLHYRQPVPGRMDRETLPTPLHYRQPVLG
RMDRETFPTPLHYRQPVPGRMDRETLPTPLHYRQPVPGRMDRETSPTPLHYRQPVPGRMD
RETFPTPLHYRQPVPGRMDRETFPTPLHYRQPVPGRMDRETLPTTLHYRQPVPGRMDRET
SPTPLHYRQPVPGRMDRETSPTPLHYRQPVPGRMDRETSPTPLHYRQPVPGRMDRETFPT
PLHYRQPVKKLTKYLDPNSHGRINFKDFCYGVFAIKGCEEILKTALGPRSVPIQTDNGYI
YQNGEARLGPPIIMCTRPYPDCRVEQGECCDMDSTNESGVGSDTSDGGRSNEKEEGLGGL
FNNSGQLIGSASASVFSGEEQFEDYGEGEDVDYTPSSPCPDDDARTNGFSDLGSSLPSSA
GQTPLKMCHLYNSDVLDVYCSQCYKKVNLLNDLEARLNNLRANSPNRKISSTAFGRQLFQ
HNHSAFSSSQGSTEDLFRDSIDSCDVDITEKVSYLEKKVTELENDSLANGDLKCKLKQGN
TQLVHRVHELEEQLKDQESRADQTLEEETHRHRETYCKMERDKNTDIELLSNRVQQLEEE
NGEMKLNVCKLKSQTEKLDQEKQRMTDRLEDTSLRLKDEMDLYRKMMDKLWQNRHEFQKE
REAMQELIEDLRRELEHLQLFKLGSEAGQGAGLSEYNAKTREIEMEHEVKRLKQENFKLR
DQNDDLNSQILSLSLYEAKNLFACHTKAQSLAAEIDNASRDELVDALKEQECVNLRLRQY
MDKIILAILDHNPSILEIKSNS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggacagggaaacattccccacacctttacactaccgccagcctgtaccaggcaggatg
gacagggaaacattccccacacctttacactaccgccagcctgtaccaggcaggatggac
agggaaacatcccccacacctttacactaccgccagcctgtaccaggcaggatggacagg
gaaacattccccacacctttacactaccgccagcctgtaccaggcaggatggacagggaa
acattgcccacacctttacactaccgccagcctgtaccaggcaggatggacagggaaaca
ttgcccacacctttacactaccgccagcctgtaccaggcaggatggacagggaaacatta
cccacacctttacactaccgccagcctgtaccaggcaagatggacagggaaacattcccc
acacctttacactaccgccagcctgtaccaggcaggatggacagggaaacattacccaca
cctttacactaccgccagcctgtaccaggcaggatggacagggaaacattacccacacct
ttacactaccgccagcctgtaccaggcaggatggacagggaaacattacccacaccttta
cactaccgccagcctgtaccaggcaggatggacagggaaacattccccacacctttacac
taccgccagcctgtaccaggcaggatggacagggaaacattacccacacctttacactac
cgccagcctgtaccaagcaggatggacagggaaacattccccacacctttacactaccgc
cagcctgtaccaggcaggatggacagggaaacattccccacacctttacactaccgccag
cctgtaccaggcaggatggacagggaaacattccccacacctttacactaccgccagcct
gtaccaggcaggatggacagggaaacattgcccacacctttacactaccgccagcctgta
ccaggcaggatggacagggaaacatcccccacacctttacactaccgccagcctgtacca
ggcaggatggacagggaaacattacccacacctttacactaccgccagcctgtactaggc
aggatggacagggaaacattccccacacctttacactaccgccagcctgtaccaggcagg
atggacagggaaacattacccacacctttacactaccgccagcctgtaccaggcaggatg
gacagggaaacatcccccacacctttacactaccgccagcctgtaccaggcaggatggac
agggaaacattccccacacctttacactaccgccagcctgtaccaggcaggatggacagg
gaaacattccccacacctttacactaccgccagcctgtaccaggccggatggacagggaa
acattgcccacaactttacactaccgccagcctgtaccaggcaggatggacagggaaaca
tcccccacacctttacactaccgccagcctgtaccaggcaggatggacagggaaacatcc
cccacacctttacactaccgccagcctgtaccaggcaggatggacagggaaacatccccc
acacctttacactaccgccagcctgtaccaggcaggatggacagggaaacattccccaca
cctttacactaccgccagcctgtgaagaagttgactaagtacctggatcccaactctcac
ggcaggatcaacttcaaagacttctgctatggggtgttcgccatcaagggatgtgaggag
attctgaagacagctctgggtcctcgtagtgtacccattcagactgacaatggatacatc
taccagaacggcgaggcccgactgggccctcccatcatcatgtgtacccgtccataccca
gactgcagggtggagcagggggagtgttgtgacatggacagcaccaatgagagcggcgtg
ggctctgacacctctgacggggggcggagcaacgagaaggaggaggggctaggtggactg
ttcaacaattctggccagctgattggctctgcttctgcgtccgtcttctcgggggaggaa
cagtttgaggactacggagagggggaggacgtggactacactcccagcagcccttgcccc
gacgatgacgctcgcaccaacggcttctcagacctcggctcctctctgccctccagtgct
ggtcagacccctctgaagatgtgtcacctttacaacagtgatgtgttggatgtctattgt
tctcagtgctataagaaggttaacctgctcaatgacctagaggccaggctcaacaacctc
agagccaacagccccaacagaaagatatccagcactgcctttggacgtcagttgttccaa
cacaaccacagtgcttttagcagcagtcagggaagcacagaggacctgttcagagactcc
atcgactcttgtgatgtggacattactgagaaggtgagttacctggagaagaaggtgacc
gagttggagaatgacagtctggctaatggagacctcaagtgtaaactcaaacagggcaac
acacagctggtacacagggttcatgagctggaggagcagctgaaggatcaggagagcaga
gcagatcagaccctggaggaagagacacatagacacagagagacctactgcaagatggag
agagacaagaacacggacatagagctgctcagtaacagagttcagcagctggaggaggag
aatggggagatgaaactaaacgtgtgtaaactgaagtctcagactgagaaactagaccag
gagaagcagcgtatgacagaccggttagaggacaccagtctgaggctgaaggatgagatg
gacctctacaggaagatgatggacaagctgtggcagaacagacatgaattccagaaggag
agagaggccatgcaagagttgatagaggacctgcgtcgggagttggagcacctgcagctg
tttaagctgggttcagaggcggggcagggggcggggctatcagaatacaacgccaagaca
cgggaaatagagatggagcatgaggtcaagagactcaaacaggagaactttaagctgcgg
gaccagaacgatgacctgaacagtcagatcctcagtctgagtctgtatgaagctaagaac
ctgtttgcctgccacaccaaggcccagtcactggctgctgagatcgacaacgcttctagg
gacgagttggtggatgctctgaaggaacaggagtgtgttaacctacgtctgagacagtat
atggataaaatcatcctggccattctggaccacaacccctctatcctggagatcaagagt
aacagttaa
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integrated database retrieval system
