Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139401936
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Entry
139401936 CDS
T10872
Name
(RefSeq) TBC1 domain family member 8-like
KO
K19951
TBC1 domain family member 8/9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139401936
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139401936
Endosome - Golgi transport
Rab GTPases and associated proteins
139401936
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Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
139401936
NCBI-ProteinID:
XP_071002059
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All DBs
Position
3:67291707..67315460
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AA seq
1140 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNEFFLLQRRRGHGDTGGKFTGLLVGALDSVLDSNARVT
PFRILLQMPGSQVSWTIACGAAVGEMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEEPEKFREALLKFELCFGLPSSEKLVTTYSCCCWKGRVPRQGWLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTDMVRVMTRRCQLDFSMFLSLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQSSNITKRVLEEQALRTYVLALFRLPRGERLQ
EVALCSVWTPHARCHTTGTLFTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRGKKAFQLIELQDRDSLVNGLTSRLRALQWKHSMFRSKKSLTSSSPYYTFCYDT
MYCDGEDIEERALRQTVNTEALMACYHHSQPDPNNSTATMEQVKERLWEDHFPEYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDASSELASHPGYYSGLVTESMGQSSLATEEIE
RDLHRSLPDHPAFQNVKGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFS
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRDRLPELAEHIPDLSPLSSISLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANATALCASADDSQALMILTGFLDQV
KYDEDPSPPTPHPLSSQSGEEEGRPPVKQHTLITDLIADSYEKFGDLTVRQIEKLRCRHR
IQVLQAHEDTTKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGGTTLALQHHD
PGRPYVEQYRVDRVQFKSLYMLLVPWLCGFHTDTVAHRTFTLLDQDRDSLITFREFAGWL
DTLYFEELNEKVRLLYRLHIPPALTESEDDPSPLKSPQLSTTGPLHVEPPNGEMRDFQEQ
LKQMLKDLAKEKEKDVEQPVPPMNQREFIQFCKTLYSMFHGNPDENELFQAIATVTSLVL
QIGEVGHRSRCSGSEVNSEGGAGDEVEDDHREGSQEEHPVFSTKEEEEGERKEGTSKSSG
SESQSEWAVSYAQILASLLTEQQLVNFFEKPMDLSAKVAEAKVKQYHERAGLLMLQQGTS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccggaggaagttttgctgaaaaatgcattgaagctttgggttaccgaa
aaatctaacgaattcttccttttgcagcgcagaagagggcatggggacacagggggaaaa
tttacaggtcttctggtgggagctctggactcagtgctggactccaatgcccgggtcaca
ccgttccgtatcctactacagatgcctgggtcacaggtcagctggacaatagcttgtggt
gctgctgtcggagagatgaacagacattgggactggctggtccagaacctactccactct
ctctcagtgtttgagaacaaggaggatgtcgccagcttcgtaaaagggaaagtcaagggt
ctgatagcggaggaggtaagggggaggcaggcggctcaggaggaggagcctgagaagttc
cgggaggcgctgctgaagtttgagctatgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaaggggcgggtcccccggcagggctggctctacctc
agcatcaaccacatggccttctactccttcctgttgggaaaggaagtgaagtttgtgatc
ccgtgggcggaggtgacgaggctggagcgggtctctacgggtctcatgacggacatggtg
cgtgtgatgacgcggcggtgccagttggacttctccatgttcctgagcctggatgaggcg
tttggggtcattggtcagctggctgacatcgccctgcgacgcctgctggacagtgaaggc
ctggagctggaccgagtcctccagcagtcctctaacataaccaagagggttctggaggag
caggcgttaaggacgtatgtcctggctctatttcggctaccacggggcgaacgtcttcag
gaggtggcgctgtgttcagtgtggacgccccatgcccgctgtcacacgacaggaacactc
ttcaccaccgacagctacctatgcttcgccagccgagaggagggccactgcagcctgctt
atccctctctcagaggtgatctccatagagaaggcggagagcaccagcctgctgccaaac
ccagtaatcgtcagcgtgaggggtaagaaagccttccagctgatcgagctgcaggacaga
gacagcctggtgaacggcctgacatcacgcctcagagccctccagtggaaacactccatg
ttccgcagcaagaaatctctgacctcctcgtctccctactacaccttctgctatgacacc
atgtactgtgatggggaggatatcgaggagagagcactacgtcaaacagtgaacacagag
gctctgatggcatgctatcatcactctcaacctgaccccaacaacagcacggctaccatg
gagcaggtgaaagagcgtctatgggaggaccacttcccggagtacggtcgaggcgtccac
atgttccgcacagagaagatccagaagctggttgccatggggataccagagtcgctacgg
ggagagctatggatgaccttctctgatgcctcatcagagttggcatcccacccaggctac
tactcggggctggtgacagagtctatggggcaaagcagtctggccacggaggagatcgag
agagacctgcaccgctctctgccagaccaccccgccttccagaacgtcaaaggtattgcc
gcgttgcgccgtgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcgatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctca
ctgctagtggctgtgtgtgagagaatgctacctgactacttcaaccgcagagttataggt
gctcaggtggaccagtcagtgtttgaagagctgatccgggatcgtcttcccgagctggcc
gagcacattcccgacctctcccccctctcttccatctccctgtcctggtttctcaccctc
ttcctcagcgtgcttcccttccgcagcgctgtctgtgtggtagactgcttcttctttcac
ggcatcaaagccatcttccagctggggctagctgtgctggatgctaacgctacggcactg
tgtgctagtgcagacgacagccaggcactcatgatcctcactggttttctggaccaggtg
aagtacgatgaggatccatctccccctacccctcaccctctctcgtctcagagtggggag
gaggagggcagaccgcctgttaaacaacacaccctgatcactgacctcatcgctgactcc
tatgagaaatttggagacctgacggtgagacaaatagagaagttgcgatgcagacaccgg
atccaggttctccaagcacacgaggacaccaccaaggagaatgcgctcagggtggtgacc
ccagatgtctctctctcccctgaaaacctggctgatgtctacgacctcttcaagacagag
cacttcatcaacctgtactggggcgatgggggcaccacattggccctccagcaccatgac
ccaggccggccctatgtggagcagtacagagtggaccgggtccagtttaagagcctgtac
atgctgctggttccctggctttgtggctttcatactgacaccgtagcccaccggaccttc
acactactggaccaggacagagactcactcatcaccttcagagagttcgctgggtggctg
gatacgctatactttgaggaactgaatgaaaaggtcagactactgtatcgtttgcacata
cctccagctctgactgagagtgaggatgacccatctccactgaagagccctcagctgtct
actaccggaccactccatgtagagccgcccaatggggagatgagagactttcaggaacag
ttgaaacagatgttgaaagacctggctaaagagaaggagaaggatgtggagcaacctgta
cctccaatgaaccagagggagttcatccagttctgtaagaccctctacagcatgttccat
ggcaacccagacgagaatgagctctttcaggccatcgctacagtgaccagcctggtgctg
cagatcggcgaggtcgggcaccgcagccgctgctcagggtcagaggtcaacagcgagggt
ggggccggggacgaggtagaggacgatcacagggaggggagtcaagaagaacatcccgtc
ttcagcaccaaagaagaagaagaaggagagagaaaggaggggaccagcaagagttcaggg
tctgagagtcagagcgagtgggcggtcagctacgctcagatcctggcttctctcctcaca
gaacagcagctagtcaacttctttgagaaaccgatggacctgtcagcaaaggtggctgag
gcaaaagtgaaacagtaccatgaaagggctggtctgcttatgctccagcaagggaccagc
tga
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