Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139401986
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Entry
139401986 CDS
T10872
Name
(RefSeq) sphingosine 1-phosphate receptor 1-like
KO
K04295
sphingosine 1-phosphate receptor 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Lipid
Sphingolipid
139401986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139401986
NCBI-ProteinID:
XP_071002124
LinkDB
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Position
Unknown
AA seq
410 aa
AA seq
DB search
MEMEASRAAYAGAFPTESIGSLPTNTSPSLLQFFWDYQNNDVIVTHYNYTGKLQTDRYRE
GLKPEAIAFLVVCLLIVLENAVVLIAIWTNKKFHLPMYYLLGNLTLSDLLAGVTYMANII
MSGPNTLRLTPILWFLREGGVFITLAASVISLLAIAIERHVTMVTMKPYHGAKKGRLLAL
IGGSWALAGLLGVLPVLGWNCMGHLDHCSTVLPLYAKSYILCCVSVFSGVLLAIVVLYAR
VFRIVRTNTQRQRLGGAKGSLRKGLARKSQKYMALLKTVTIVLGVFIACWLPLFLLLGLD
SFCPARRCRLLLKADYFLGVAMVNSLLNPIIYTLTSKDMRRAILKLLCRPCLMTKDGQVK
RMGVPFLECSFSKTEVASKKLEGLETTISSGNIVTAQSPIKTLYPKLFKV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagcctcccgtgctgcttacgctggggccttccccactgaatctataggc
tctctacccaccaacacctctccaagcctgctccaattcttctgggattaccagaacaat
gatgtcattgtgacgcactacaactacacaggcaagctccagacagaccggtatcgtgaa
gggttaaaacctgaagccatagccttcctggtagtgtgtcttcttatcgtcctggagaat
gctgtggttctaatagccatctggaccaataagaagttccacctgcccatgtactatctc
ctaggtaacctgactctgtcagacctcctggccggtgtcacctacatggctaatatcatc
atgtctggtcctaatacactgagactaactccaatactctggtttctgagggaaggaggc
gtctttatcacattagccgcctccgtcatcagcctattggccatcgctatagaacgccac
gttaccatggtgacaatgaaaccataccacggggcaaagaagggtcggctgctggctctg
atcggggggagctgggcgttagcagggctgctgggggtgctccccgtcctgggctggaac
tgtatgggtcatctggaccactgttccacggttctcccgctctacgccaagtcttacatc
ctgtgctgtgtgtccgtgttcagcggcgtgctcctcgccatcgtcgttctctacgcccgc
gtcttccgtatcgtgcgcactaacacccagcgccaacgcctcggaggagcaaagggaagc
cttcgcaaaggcctcgccagaaaatcccagaagtacatggcgctcctcaagacagtcact
attgtactcggcgtcttcatcgcttgttggttgccgctcttcctcctcctcggcctagac
tcattctgccctgcccgccgctgccgactgctcctcaaggcggactacttcctgggcgtt
gccatggtgaactcgctcctcaaccccataatatacaccctgaccagcaaagacatgcgt
cgcgctattttaaaactgctctgccgcccgtgtctcatgaccaaggacgggcaggtgaag
aggatgggggtgccgttcctggagtgtagcttcagtaagacggaggtggcatcgaagaag
ctggaaggcctggagacgacgatctcctctgggaacatcgtcacggctcagtcacccata
aagactctctaccccaagctcttcaaggtttaa
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