Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139401999
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Entry
139401999 CDS
T10872
Name
(RefSeq) cysteine protease atg4da-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04136
Autophagy - other
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139401999
04136 Autophagy - other
139401999
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139401999
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139401999
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139401999
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
139401999
Membrane trafficking [BR:
ocla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
139401999
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139401999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
NHS
Motif
Other DBs
NCBI-GeneID:
139401999
NCBI-ProteinID:
XP_071002142
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MNSVSPSAVQYVGGVGVVCQDDALQREETKRPQQPQLVDAGGGSGFGKWQGTDVGGGGTR
DAATAGEPDEVDKLKTKLMSAWNNVKYGWSVKSKTTFNKSSPVTLMGHSYLLNSEDEVER
FRRAFVSRLWLTYRREFPQLEGSTLTTDCGWGCMLRSGQMLLAQGLLLHLLPRDWSWPDA
QQFADVDFEALRPRSPSRAGGVPIPSFGYSSSSRTPTTPQKTSMPGGTALNHTQKKRPES
GRDRQAEPLHRRVVAWFGDEPPAPFGVHQLVELGKSSGKKAGDWYGPSVVAHILRKAVAK
TSEVHNLAVYVAQDCTVYKKDVVHLCDQSLNQSISDPEPSGPGWKSVIILVPVRLGGDSL
NPSYIKCVRNILRLECCIGIIGGKPKHSLFFIGCQDEQLLYLDPHYCQSVVDVTQDNFPL
ESFHCSSPRKMPFSRMDPSCTIGFYAKNKKDFESLCSAVCVALSSPEEKYPIFTFVEGQA
QDYGLVGHSSSYPHYDTSPTPGPAHMPPQGKLSRSNNIGSSDDFVFL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaactctgtgtctcccagtgcagttcagtatgtggggggagtaggagtggtgtgtcag
gatgacgccctccagagagaggagaccaagaggcctcagcagccacagctggtggacgct
ggtggaggaagtggctttgggaagtggcagggtactgatgtcggtgggggtggaaccaga
gatgccgccaccgctggagagccagacgaggtggacaaactcaagaccaagctgatgtcg
gcgtggaataatgtcaaatatggctggtcagtcaagtcgaagaccacattcaacaagagc
tctccggtgactttaatgggccactcctatctgctcaatagtgaagacgaggtggagcgg
ttcaggcgggcgttcgtgtctcggctgtggctgacctaccgtagggagttcccccagctg
gagggctccaccttgactacagactgtggctggggctgcatgctgcggagcggacagatg
ctgctggcccaaggcctactgctacatctgctgccacgagactggtcgtggccagacgcc
cagcagttcgctgatgtagactttgaggctctgagaccccgctccccgtcccgtgctggt
ggcgtacccatcccctccttcggctactcctcctcctcgcggacccccaccacgccccag
aagacctccatgccagggggcacggctctcaaccatacccagaagaagaggcccgagtcg
ggcagggacaggcaggctgagcccctccaccggagggttgtggcctggtttggggatgag
cccccggccccgtttggggtgcaccagctggtagaattggggaagagctcagggaagaag
gcgggggactggtacggcccctcagtggtggcacacatactacgaaaagcagttgccaag
acttctgaggttcacaacctggctgtatatgtagcgcaggactgtaccgtgtacaaaaag
gacgtggtgcatctgtgtgaccagtcgttgaaccagagtatatcagatcctgagcccagt
ggtccaggctggaagtctgtcatcatactggttccagtccgactaggaggagactctctc
aacccctcctacatcaagtgtgtcaggaacattctcaggttagaatgctgtatcgggatc
atcggcggcaaacccaagcattcgctgttctttatcggctgccaagacgagcagctgctg
tatctggaccctcactactgtcagtccgtggtggatgtcactcaagacaacttcccactg
gagtcgttccactgtagctcgcccaggaagatgccctttagtcgcatggaccccagctgt
actataggcttctacgccaagaacaagaaggactttgagtctctgtgttctgccgtctgt
gtggccctatcgtcgcccgaagagaagtaccccatctttaccttcgtggagggccaggcc
caggactatggactggtgggccacagctcctcctatcctcactatgacacctcccccacc
cctggccccgcccacatgccgccccaaggcaagctcagcaggagcaacaacataggcagc
tctgacgactttgtcttcttgtga
DBGET
integrated database retrieval system
