Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402032
Help
Entry
139402032 CDS
T10872
Name
(RefSeq) vasorin-like
KO
K24500
vasorin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139402032
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139402032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
fn3
LRR_EndoS
LRR_14
LRR_NXF1-5
LRR_9
EGF_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
139402032
NCBI-ProteinID:
XP_071002183
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MAPFLPLLLLLSSSSSVLSSDCPEDCSCQAQGSIFCIQRRSTVVPRGLPSSVKHLYVFQN
GINTLAQDDFTGLGELEMLDLSQNKLTEVPDGVFETLSSLRNLDLSANYITHIAKDSFSG
LVQLERLYLHGNLIKSIQSEAFEVLEDLLELKLQGNQLTGLPMLRLPSLLLLDLSFNSLP
TLGPQDLQTPHLESLKVAALGLTTLDSDLMASLGNLHDLDVSQNQLEGMPEALKATRGLI
KLSLAANPIGELRNEDFQSLVGLQELDLSGLNLQGLPQGFFQLFPRLGHLTAAENPFNCL
CPLAWFPGWLKEKNVDLGRTEETRCHFPPVNAGKVLAALDHQDFGCPPTTTVMTNALGEG
STSAPPIPTTSPGNTHTNAIPPPPPFPSDEPSSTETDIESRPPPPASPTTAFRDEGHICP
PNICLNGGTCRFDPLGQLGCLCPRGTMGLYCENLESSKHNQPPLQTSAPEVMASMVAPIV
TSDPNDISSRQVTSTSILLDLHRFLETRPHIRGIKLTYRNLSGPDRRPMSLSVPASYPEY
TLRGLRPNCTYSVCASPLAERVNGGGGGGGSPTEGGSCMEARTEGGTQASSLEPQVDDQS
QLTYTLIPALAALALVTGVAVVAILVLFLRRRRAHMALEGGEMGPMELEGLKACLENGVG
NGGTLPHKGADIAPCHTSIPTQPQNGGSSHPLPQNGGLEYEAPLMKGQGHCPSNNNVASL
KPSYF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccttcctccccctcctcctcctcctctcctcctcttcctctgtcctctccagt
gactgtccagaggattgctcttgtcaggcccagggttccatcttctgcatccagcgtcgt
tccaccgtcgtcccccgcggcctcccttcctctgtgaaacatctctacgtcttccagaac
ggcatcaacactttagcccaggatgacttcacaggcctgggggaactggagatgctggac
ctgtcccagaataaactcacggaggtcccggatggggtctttgaaacgctatcttcactg
aggaatctcgatttgtccgcaaactacattacccacatcgccaaggatagcttctccgga
ttggtgcaactcgagaggctgtatctccacggcaacctcatcaagagcatccaatcggag
gccttcgaagttctggaggatcttctggaactgaagctccaggggaaccagttgaccggt
ctcccaatgctccgtctccccagccttctcctcctggatctcagcttcaactctctcccg
acgctgggtccccaagacctccagaccccccacctcgagtcgctcaaagtggctgcgttg
gggctcaccaccctggactcagatctgatggcctccctggggaacctccatgaccttgat
gtgtcccagaaccagctggaggggatgcctgaagcattgaaggccacccgggggcttatt
aagctcagcctggctgccaaccccattggggagctccggaacgaggacttccagagtctg
gtgggtctccaggagctggatctcagtgggctgaacctccagggcttgccccagggtttc
ttccagctcttccccaggctggggcacctcacggcggccgagaatcccttcaactgtctc
tgtcctctggcctggttccctggctggctgaaagagaagaatgtggatctgggacgcaca
gaggagacaaggtgccacttcccaccagtgaatgctggcaaggtgctggcggcgctggac
catcaagatttcggctgtccacctacgaccactgtcatgacgaatgccctaggggagggg
agtacttccgcaccccccattccgactacatcccctggaaacacacataccaacgccatc
cccccacctccgccattccctagtgatgaaccatcctcaacggagacagacattgagagt
cgtccccctcctccagcttctccgactaccgctttcagggatgagggccacatctgcccg
ccgaacatctgcctcaatgggggtacgtgccgcttcgatcctctgggacagcttggatgt
ctctgtccccgcggaactatgggcttgtactgcgagaacctggagtcgtctaaacacaac
cagccacctctccaaacctccgcccccgaggttatggcatccatggtcgcccccattgta
acctctgatcccaatgacatcagttcccgtcaggtgacctccacgtccatcctcctcgac
ctgcaccgtttcctcgagacgaggccgcacatccgcgggattaagctgacctaccggaac
ctctcagggcccgaccggcgccccatgtccctcagcgtccccgcttcgtacccagaatac
accctccgagggctccggcccaactgtacctactcggtgtgcgccagccccctggcagag
agggtgaacgggggtggaggcggtggaggtagccctaccgagggagggtcttgtatggag
gctcgtaccgagggaggtacccaagcttcgtccttggagccccaggtggatgatcagagc
cagctcacctacaccctcatcccagccttggctgctctcgccctggtcacgggggtggcg
gtggtggccatcctggttcttttcctccgaaggagacgggctcacatggcgctggaaggg
ggtgagatgggaccaatggaactggagggccttaaggcttgtctggagaacggcgtgggg
aacgggggcaccctaccccacaagggagcggatatcgccccctgtcatacctccatcccg
acccagccacaaaatggcggatcgtcacatccccttccacaaaatggtggtttagaatat
gaggcccccctcatgaagggacaggggcactgtccatcgaataataatgtggcatccttg
aagccatcgtatttctag
DBGET
integrated database retrieval system
