Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402262
Help
Entry
139402262 CDS
T10872
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139402262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139402262
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
139402262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
DGOK
Motif
Other DBs
NCBI-GeneID:
139402262
NCBI-ProteinID:
XP_071002461
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MTGIHVEGLAAIALFYVLILAVGIWAAWKNKHAGEAEGTDRSETIMVGGRDIGLFVGGFT
MTATWVGGGYINGTAEYVYLPGYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDP
FQQKYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIIDINIKMSVVISACIAIFYTL
VGGLYSVAYTDVVQLFCIFLGLWVSVPFALSNPAVSDIKISAVKEIYQAPWKGNIKREDA
WVWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVMIGAIGAS
TDWNQTPYGPVPPKERDQADMILPIVLQYLCPPFVSFFGLGAVSAAVMSSADSSILSASS
MFARNIYQLAFRQSASDTEIVWVMRVTIFVFGGLATAMALLTGTVYGLWYLSSDLVYVII
FPQLISVLFVKGTNTYGSVAAYVFGLILRIGGGEPYLSLPPFIYYPGWQIEDRIHHLTGE
VEHIVVQKFPFKTVSMLASFLGNVAFSYLAKYLFESGKLLPKYDFLDAVLAQHSIENMDK
TTLVNRNTIVLSEMAPVKPRLSVQLAATFTRRDTLAEEDSSPEDSPNHETLD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtatccacgtggagggactggcggcgatcgccctcttctacgttctgatcctt
gcggtggggatctgggcagcgtggaagaacaaacacgccggggaggcggagggcacagac
cgcagtgaaaccatcatggttggtggaagggacattggtttatttgttggtggttttacc
atgaccgcgacctgggttggtggcggatacatcaacggaacggcggagtacgtatatctt
cctggttacggcttggcttgggcacaagcgccttttggatatgcgctaagtctagtcgta
ggaggtctgttcttcgccaagcccatgcgctccagaggttatgtcaccatgctggaccct
ttccagcagaagtatgggaagaggatgggtggtctgctcttcatacctgctctaatggga
gagatcttctggtcggcggccattttatctgctctgggagccacgctgagtgtgatcata
gacataaacatcaagatgtctgtggtgatctcagcctgtattgcgatcttctacacgcta
gtcggaggtctgtattctgtagcctacaccgacgtggtgcaactcttctgtatcttcctg
ggactgtgggtttcagtaccgttcgctctgagcaacccagcggtgtctgacatcaagatc
agtgcagtgaaggagatctaccaagctccctggaagggaaacatcaagagagaagacgcc
tgggtctggatagacaacttctgtctgctgatgttgggggggattccctggcaggtatat
tttcaacgggttctctctgcctcttcagctacgtacgcccaggtgctctcgttcatcgcc
gctgcagggtgcctggtcatggccgtgccctcagtaatgatcggggctataggggcctcc
acagactggaaccagacgccgtatggacctgtacctcccaaggagagggaccaggcagac
atgatattacccatagtcctccagtacctctgtcctcccttcgtctccttcttcggcctg
ggggcggtctctgctgccgtgatgtcatctgccgactcctccatcctatcagctagctcc
atgtttgctcggaacatctaccagctggctttccgccaatcggcatcggacaccgagatc
gtgtgggtgatgcgtgtcaccatctttgtgttcggcggcctggccacggcgatggcgttg
ctaacggggacggtgtacgggctgtggtacctgagctccgacctggtctacgttatcatc
ttccctcagctcatctccgttctcttcgtcaagggaaccaacacgtacggttccgttgct
gcttacgtctttggtctgatcctgaggatcggaggaggggaaccctacctctcactaccc
cccttcatctactaccccggctggcagatagaggaccggatccatcatctgactggagag
gtggaacacatcgtggtgcagaagttcccgtttaagaccgtctccatgttggcctccttc
ctgggcaacgtggctttctcctacctggccaagtatctgtttgagagcggcaagttgttg
cccaagtatgacttcctggacgcggtgttggcccagcacagcatagagaacatggacaag
accacgttggtcaaccgtaacaccatcgtgctgtctgagatggcgcctgtcaaaccacgg
ctcagcgttcaactggcggctacgttcacccgcagagacactctggctgaggaggactcg
agtcccgaagacagccccaaccacgagaccctggactaa
DBGET
integrated database retrieval system
