KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402528
Entry
139402528         CDS       T10872                                 
Name
(RefSeq) vascular endothelial growth factor D-like
  KO
K05449  vascular endothelial growth factor C/D
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010  MAPK signaling pathway
ocla04020  Calcium signaling pathway
ocla04510  Focal adhesion
ocla04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139402528
   04020 Calcium signaling pathway
    139402528
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    139402528
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139402528
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocla04052]
    139402528
Cytokines and neuropeptides [BR:ocla04052]
 Cytokines
  Growth factors (RTK binding)
   139402528
SSDB
Motif
Pfam: PDGF DUF8200 DEFL268
Other DBs
NCBI-GeneID: 139402528
NCBI-ProteinID: XP_071002625
LinkDB
Position
Unknown
AA seq 310 aa
MQRMLAAGVGMMLVLVRLNLGMPNKVQDDPSSLRVINQEKWERDVRSASSLDELLMLTDF
PDWKLWKCRLKLKHLETSPSSSSSQQPNHRSSSSSSSAGSHRSTRYAVASYSLEILKAID
DEWQKTQCTPRETCVDVAKELGTTTSMFFKPPCVSVFRCNGCCNKEGVSCRNTSTAYVNK
TLLSVIPFKYGPEPVLIKVANHTECKCMEPPLIRRQAHIRSHRRNGCSPMRQLSKSEDSR
RLCASGLIWDCMADRCVSYPSTEQPDFSPNMRTVDCDIDVDRCDCVPDRTTLSPQPTLTQ
DPDHPTLHVT
NT seq 933 nt   +upstreamnt  +downstreamnt
atgcagaggatgcttgctgccggtgttggaatgatgctggtgttggtgaggttgaacttg
ggaatgccaaacaaggttcaagatgatcccagctctctcagggtgatcaaccaggagaag
tgggagagggatgtgcgttcggcctccagtctggacgagctgctcatgctgacagatttc
cctgactggaagctgtggaagtgtcgtctaaaactcaaacacctggagacgtctccctca
tcctcttcctctcagcagcccaaccaccgttcctcctcctcctcctcctccgctggatca
caccgctccacgcgctacgctgtagcatcctacagcctggagatactcaaagccatagat
gatgaatggcagaagacccagtgcacgcccagagagacgtgtgtagacgtggcaaaggaa
ctgggcaccacgacctccatgttcttcaagcccccctgcgtgtccgtcttcaggtgcaac
ggatgctgcaacaaagagggtgtatcgtgcagaaacacaagtactgcctatgttaataaa
acactgctgagtgtgataccgttcaaatacggacctgagccggtgttgataaaggtagcc
aatcacacagagtgtaagtgtatggaaccacccctgatccgacggcaagcccatatacgc
tctcacaggaggaacgggtgctctccgatgcgtcagctctctaaatcagaggactccagg
cgtctgtgtgccagtgggttgatctgggactgcatggccgaccgatgtgtgtcctacccc
tccactgaacaaccagacttctctcccaatatgagaacggtggactgtgacatagatgtt
gacaggtgtgactgtgtcccagaccgcactacactgtccccgcagcccaccttaacccag
gacccagatcatcctaccctgcatgtcacctga

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