Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402631
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Entry
139402631 CDS
T10872
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2-like isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139402631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139402631
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139402631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
Motif
Other DBs
NCBI-GeneID:
139402631
NCBI-ProteinID:
XP_071002644
LinkDB
All DBs
Position
3:complement(68885798..68914798)
Genome browser
AA seq
1602 aa
AA seq
DB search
MEQDTSPESVTSPPPGAAAKSKLDTLSKDDLIKFAKKQMAAIQKMKSKCAVLEKEVDTLK
SQPKGNSGDSIIQELTERMSALLLEKAETQQSAVLLRKENEKVKHREQDAVGKLATLLGE
LDQAKEDHQKKIASLEKSLDSSQAKHKEEVEFFQRLLRKKEENDREKESEREKEKQRERE
HTNQSVEAVSCSLESQILSLQTELAAALERSAQVASVLQEDHQRALTEAQQEVENLREEL
AQHSVQHEEELRALEEDFEMEKERLLLLQEELSEQLALKDSFLQDVQEDEEEPSGRSSGL
ARMLQLSGLSLIDASDGETESGQLRSALEDQQSQNTMLQDELTFLGNVKTELEAELERVR
EEFHTEKEELQFKIEELLMTREVATPNRDLLSLETPNRDLQEAQAFTQLQQSGPQRDSVD
GLPASPASPSSPRQSMSCPVPGAAHQSLTLQEQQSQAQELRSQCESLDRSQAVAEYEHTR
DILRGLETELGQRTGDVTRQYEAMKEQAASAIQELQESVRRLTEERDGLVERVKGFDEDR
DSLLEKVQGLEKRLESFLKLTQAAEGLKEQLQTSMEEKTALALKLKNSVEAQTVLASELK
ASLEVQTVLAVELRASVEDLSKQNGEILSQLQMKESAVQELEETVDVVSTERDRTLSALQ
DREMEVMRLWEEREREVEESQGQREEVAELQARIEELEKERSLLKNNLEVVQRESSKNVQ
GSPGEEVEELQARIEELEKERSLLKSNLVEVVGDTEALQKDLREMKLANEKMRTENQELL
TQVSQATETQVSQATETLADREREEKEGRETEREEEEEQAEKESRELNQQLTEKDTLISQ
LRSEMAGLLSSAPSPVSEENTANEFTEKIALLEKESKEKDERMNKIKAVAVKARKELDTS
RKEAVSLKEEVEVLKAERERVTSSMKDIIHGAEGYKNLQLDYDRQTEQLDKERETVEGAE
KQISELTKRLNNAVQQHEQLWSEREDLMTELEILRNTVRQMEGQTAELHRQTDTLNRDLQ
AERLLKEQKTKELSSLQKEVEELTVQLRRQKQQSQQTTQELEQLRKEAQQSLLLDMEMAD
YERLVKELNTKLSEKDVCVEELKTQIHTHTQKEDTLNQEIEVLKSQLDQGEDKSSKMKQL
LVKTKKDLADAKRQEAIQMMTLASLKGELEAHQQQLENNKIQCCDLTAERHRLQEQLRTL
TEQQQRTSSSLQQRLTTLQQEANTAKAELSSVTAEFDSYKVRVHNVLKQQKNKTSAQSDG
DATKQEREQMESLVDQYKAKLQDSQQSLAVSTAELQQLQMEHDTLLERHNKILQETVAKE
AELRERFMSLQAEIMSLRTEHAQTVGQLTSQAVAQRSGFREQIRHLQDEHRTTVETLQNQ
MTRLENQLFTLQKQTSPAPVQTSRKSAVDRRPVDQGVTGGLGLGDLQSMAREEGEGMETS
ETESLSSTYLPSLEQLLTSPDPKQEPFVWQVEPTKEELNQKLTTATRSMEHMNGLLHETE
ATNAVLMEQVNLLKSEVRRLERNHEREKSVANLEYLKNVLLQFIFLQSGSERQALLPVIH
TMLQLSPEEKNKLAAIAMGEEEVGGARGSGWTSYLHSWSGIR
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacaccagcccagagtctgtgacctcacctcctccaggtgccgccgctaag
tcaaagttggacacgttgtccaaagatgacctcatcaagtttgccaagaagcagatggct
gccatacagaagatgaagtccaaatgtgcagttttggaaaaggaggttgatactctcaag
tctcagccaaaaggcaattcaggtgactccatcatacaggaactgaccgagaggatgagt
gccttgttgctggaaaaggctgagacccagcagagtgcggtgttgctgcggaaggagaat
gagaaggtcaagcaccgggaacaggatgcagtagggaaactggccaccctgctgggagag
ttggaccaggccaaggaagaccaccagaagaaaattgcatccttggagaagagcttagac
tcatcccaagccaaacacaaagaagaagttgaatttttccagaggcttctgaggaagaaa
gaagagaatgacagagagaaagagagcgaaagagagaaagaaaagcagagagaaagggaa
cacacaaaccagagtgtagaagctgttagctgcagcctggagtcacagatcctgagtctg
cagacagagctagctgcagccttggagcgaagcgctcaggtggcttcagtgctgcaagaa
gaccaccagagggcgctgacagaggcccagcaggaagtagagaacctgagagaggagttg
gctcagcatagtgtgcaacatgaagaggagctgagagctctggaagaggactttgagatg
gagaaagagagactgctactcctccaagaggagctcagtgagcagctggctctcaaagac
agcttcctgcaggatgtgcaggaagatgaggaggagcctagcggccgcagctcagggcta
gccaggatgttgcagctgtctggtttaagtctgattgatgccagtgatggagagacagag
agcggacagctacgatctgccctggaggaccagcaatcccagaataccatgctgcaagac
gagctgaccttcctggggaatgtgaagactgaactggaggcggagcttgagagggtgagg
gaggagtttcatacagagaaggaggaactacagtttaaaatcgaagagttgcttatgacc
cgggaggttgcgacccctaaccgtgatcttctgagcctggaaacccctaaccgtgacctt
caggaggctcaagctttcactcagctccagcagagcggcccacagagagattcagtggac
ggcctacctgccagtcctgctagcccctccagccccagacagagcatgtcctgccctgtc
cctggtgcagcccaccagagcctgaccctgcaagaacagcagagtcaggctcaggagctg
aggtcccagtgtgagtccctagacaggagccaggcggtggctgagtacgaacacaccaga
gacatcctgagaggcctggagactgagctaggtcagaggaccggggacgtcaccagacag
tatgaagctatgaaggaacaggcggcttctgcaatccaggagctacaggagagcgtcaga
aggcttactgaggagcgagatggtctggtggagagggtgaaagggttcgatgaagacaga
gacagcctgttggaaaaggtccagggcctggagaagaggctggagagcttcctaaagctg
acacaggcagccgaggggctgaaggagcagctgcagacgtctatggaggagaagactgcg
ttagccctcaagctaaagaactcagtagaggcgcagacagtgttagcgtctgagctaaaa
gcttctcttgaggtgcagacagtgttagctgtagagctaagggcttcagtggaggatctg
agcaagcagaatggggagatcctctctcagctacagatgaaggagagtgctgttcaggag
ttagaggaaacagtcgatgtggtgagcacagagagagacagaacactgtcagcactgcag
gacagagagatggaggtgatgaggctgtgggaggaaagagagagggaggtggaggagagt
caaggccaaagagaggaggtggctgagctacaggctcgtatagaggagttagagaaggag
aggagcctgctgaagaataatctagaggtggtgcagagggagagttctaagaatgtgcag
gggagcccaggggaggaggtggaggagctgcaggctcgtatagaggagctggagaaggag
aggagcctgctgaagagtaatctggtggaggtggtgggagatactgaagctctacagaaa
gacctaagagagatgaaactggccaatgagaagatgagaacagagaaccaagaactactg
acacaggtcagccaggctacagagacacaggtcagccaggctacagagacactggcagac
agagagagggaggaaaaggagggaagagagacggagagagaggaggaggaagaacaggcg
gagaaggagagcagagagctaaaccagcagctaacagagaaggacacattgatatctcag
ctgagaagtgagatggctggcttactgtcttcagccccgtctcctgtctcagaggagaac
acagccaatgagttcactgagaaaatcgccctgctggagaaggaaagcaaagagaaggat
gagaggatgaataagatcaaggcggtggctgtgaaagccaggaaggagctggacaccagc
aggaaagaggctgtgtctctgaaggaggaagtggaggtgttgaaggctgagagagagaga
gtgaccagctcaatgaaagacatcatccatggagcagagggatacaagaacttgcagctg
gactacgacaggcagacagagcagctggataaggagagagagacggtggagggagctgag
aaacagatctctgagctgaccaaacgactaaacaacgcagtacaacagcatgaacagctg
tggtcggagagagaggacctgatgaccgaattggagattctgaggaatacggtgagacag
atggaaggacagacagcagaactacacaggcagacagacaccctgaacagagacctgcag
gctgagcgactactgaaggaacagaagacaaaggagctgtcgtcgttgcagaaggaggtg
gaggagttgacagttcagctccgcagacagaagcagcagtctcagcagacaacacaggag
ctggagcagctacgcaaggaggcccagcagagcttgttgttggacatggagatggcagac
tatgaacgcctggtcaaagaactcaacaccaaattgtcagagaaggacgtgtgtgtggag
gagctgaaaacacagatacacacacacacacagaaagaagacacactcaaccaggagatc
gaggttctgaagtcccagctggaccagggggaggataagagctccaagatgaaacagctg
ctggtgaaaaccaagaaagacctggctgatgccaagagacaggaagccattcagatgatg
acgctggcctctctgaagggagagctggaggcacatcaacagcaactagagaacaacaag
atccagtgctgtgacctgacggcggagcgccacagactgcaggagcagctgaggactctg
actgaacaacagcagagaacaagcagctccctgcaacagagactgaccacactacagcag
gaggctaacactgccaaggctgagctgtcatctgtcactgctgagtttgacagctataag
gtcagagttcacaacgtcctcaaacaacagaagaacaaaacctcagcacagagcgatgga
gacgccactaaacaggagagagagcagatggagtccttggtggaccagtataaagccaag
ctgcaggacagtcagcagagtctggcggtgagcactgcagaactacaacagctccagatg
gaacatgacacactgctggaacgacacaacaagatactgcaggagaccgtcgctaaagag
gccgagctcagagagagattcatgtctctccaggctgagattatgtcactgcgaacagag
catgctcagacggtgggtcagctgacctcgcaggccgtggcccagcgctcagggttcagg
gagcagatccgccaccttcaggatgaacacagaactacagtagagaccctgcagaaccag
atgacccggctggagaaccaactgtttacactgcagaaacagaccagtccagctccagtc
cagaccagtcgtaagtcagcggtggaccgccggcccgtggaccagggggtaacagggggg
ctgggcctcggtgatctccagtccatggctagagaggagggggagggcatggagacctcc
gagacagagtccctgtcatccacatacctaccctcactggagcaactacttacctcccca
gaccccaaacaggagccgtttgtgtggcaggtggagccgactaaagaggagttgaatcag
aagttgaccacagctacacgcagtatggaacacatgaatggtctactgcatgagaccgaa
gctactaacgctgttctgatggaacaggtcaatctgttgaagtctgaagtgcgtcgtctg
gagcgtaaccatgagagagagaagagtgtagccaacctggagtatctgaagaatgtcctt
ttacagttcatcttcctgcagtcaggcagcgagagacaggctctactccctgtcatacac
accatgttacaactcagccctgaggagaagaataaactggctgctatcgcaatgggtgag
gaggaggtgggaggagctagaggctcaggatggacctcctacctacacagttggtcaggc
atcagatga
DBGET
integrated database retrieval system
