Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402870
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Entry
139402870 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139402870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139402870
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139402870
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139402870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf_RING_Vps8_fungal
PHD_NSD
zf-UDP
zf_RING_Vps8
zf-ANAPC11
WWE_5
zf-RING_Vps41
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139402870
NCBI-ProteinID:
XP_071002865
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MRNMRVEDGRIVSLGFEPISKTKPPTQRTATMLHASAVVVWEWLNEHGRWRPYSPTVSHH
IEAVIRSDPRGGSVVLGQVDNRLSPYILDLQSMHQFRQDTGMIRPVRRSFYDPTSAPGQG
WLWEWENDTGSWTQYDTEVGIAIQTARDRQQPWLDLAPLGFCYLVDLQGMTQINRQTQRQ
RRIQRRSDVAYPLVSGPVPRNGGAGSGPTGALLGVGVSGVNGRAVYPSGGLATMQSLAGQ
PCSCQQCMLVFSVKQSTVRSSTHKLGHRPSKLQSKPPSPKSATLGRGQLRSSPARSAYSK
TLPHGLSISRNQSSPRRNAALFARSLSLLSAQTGTLSISNRPPPPSLPPPQPPSSNQGRR
PSVPPPSPSSTSQPVPTATLVTPATAVTSPPSPVPSPSPRPMAPQRSAACSAPLPQRSSL
AGLSRPALQRIAMAQSRALIASGVPTVPVKNLSGNSPVHPALAGITGILMSAAGFPVCLT
RPPKLVLHPPPVSKRDIKPVPGLGHCCRKTTKKQARKGKTTEEVVKQYLQKVRIAPEENC
TICMEALGGVSGYKGGDFIGRLAQCGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKT
GNQPPGKMEYHVIPHSLPGHHDCKTIRIIYNVLPGIQGPEHPNPGKPFTARGFPRHCYLP
DSEKGRKVLRLLLTAWDRRLVFSVGTSSTTGELETVIWNEVHHKTEFGSNLTGHGYPDPS
HLDNVLDELKAQGITEEEEQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacatgcgtgtggaagacgggcggatagttagtcttggttttgaacccatttct
aaaaccaagcctccaacgcaacgaacggccaccatgctccatgcgtccgctgtggtcgtg
tgggaatggctcaacgaacacgggcggtggcggccctacagcccgaccgtctcccaccac
atcgaggcggtgatacgaagcgatccccgtggtgggagcgtcgtgctaggccaagtcgac
aaccgcctctcgccctacatcctagacctgcagtcgatgcaccagttcaggcaggacaca
ggtatgatccggccggtgcgccgtagcttctacgatcccacgtcggcgccgggccagggt
tggctgtgggagtgggagaacgacacgggctcctggacccagtacgacacagaggtcggc
atcgccatccagacggcccgggaccgccaacagccctggctggacctggcgccgctggga
ttctgctacctggtggacctgcagggcatgacccagatcaacagacagacccagagacaa
cgcaggatacagcggaggtccgacgtggcctacccactagtgtcaggaccggtacccagg
aacggaggtgcaggatcgggtccaacgggagcgttactgggtgttggggtgtcgggcgtc
aacgggcgcgctgtgtacccaagcggcgggctagcgaccatgcagtccctcgccgggcag
ccgtgctcctgccagcagtgcatgctggtctttagtgtgaagcagagcacagtgaggtca
tcgacgcacaagttgggccaccggccgagtaaacttcagagtaaaccacccagccccaaa
tctgccaccctggggcggggccaactcaggagctcccccgctagatctgcctactccaaa
accttacctcacggactctccatatcccggaaccagtcctcaccgcgacggaatgctgcc
ctcttcgcccgctccctctccctcctcagcgcccaaacaggcaccctctccatctccaac
cgaccccctcctccctccctcccgccccctcagccgccctcctccaatcagggccgccgt
ccgtccgtgccgcccccctctccctcctccacgagtcaaccggtgcccacggccacgctc
gtcaccccggcgaccgccgtgacgtctccgccctctcccgtgccgtccccgtcgccgcgg
cccatggctccccagcgctcggcggcgtgctctgcccccctgccccagcggtccagtctg
gctgggctcagccggcccgccctgcaacgcatagccatggcccagtcacgagccctcatt
gcctctggcgtgcccactgtcccagtgaagaacctcagtgggaacagcccggtccaccca
gcgctggccggtatcacggggatcctgatgagcgctgcggggttccctgtgtgtctcacc
cgcccacccaaactggtgctgcaccccccgcccgtcagcaagagggacatcaagcccgtc
cccggcctgggtcactgctgccgcaagaccaccaagaaacaggcccgcaaaggtaagaca
acagaggaggtggtgaagcagtatcttcagaaagtcaggatagcaccagaggagaactgt
accatctgtatggaggccctcgggggggtgtcaggctacaagggtggtgacttcataggt
cgcctggcccagtgtgggcaccagtaccacctccagtgcctggtggccatgtacaacaac
ggcaacaaagatggcagcctgcagtgccccacctgcaaaaccatctacggcgtgaagacg
ggcaaccagccgcccgggaagatggagtaccacgtcatcccccactcgctgcctggccac
cacgactgcaagaccatccgcatcatctacaacgtcctgcctggcatccagggcccagag
caccccaacccaggcaagccctttacagccagagggttcccgcgtcactgctacctccca
gacagcgagaagggacgcaaggtactcagactcctgctgaccgcgtgggaccggcgcctg
gtcttctcagtgggcacgtccagcaccacaggcgagttggaaacggtcatctggaacgag
gtgcaccacaagacggaatttggctccaacctcacgggccacggctaccccgaccctagc
catctagacaacgtcctggatgaactgaaagcacagggcatcaccgaggaagaggagcaa
tga
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