KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139403160
Entry
139403160         CDS       T10872                                 
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
  KO
K10373  tropomyosin 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04260  Cardiac muscle contraction
ocla04261  Adrenergic signaling in cardiomyocytes
ocla04814  Motor proteins
ocla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    139403160
   04820 Cytoskeleton in muscle cells
    139403160
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    139403160
   04261 Adrenergic signaling in cardiomyocytes
    139403160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocla04812]
    139403160
   04147 Exosome [BR:ocla04147]
    139403160
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     139403160
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   139403160
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ TMF_DNA_bd DUF3450 EzrA DUF745 PUMA_CC CENP-F_leu_zip Crescentin Lebercilin GAS
Other DBs
NCBI-GeneID: 139403160
NCBI-ProteinID: XP_071003002
LinkDB
Position
1:30085234..30102153
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDEISELEKKLRITEDERDKV
LDEFQAAEEKLLSAEEVATKAEADVASLNRRIQLVEEELDRAQERLTTALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQSEKYSHKEDKYEEEMKVLTDKLKEAETRAE
FAERSVTKLEKTIDDLEEKLAHAKEENLDMHQMLDQTLMELNNM
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccatcaagaagaagatgcagatgcttaaactcgacaaggagaatgctttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagttagag
gatgaaataagtgagttggaaaagaaattgcggatcaccgaagatgagagagataaagtg
cttgatgaattccaagccgccgaggaaaaattgctgagcgccgaggaggtggccaccaag
gctgaggccgatgtcgcttcccttaacagacgtatccagctggttgaggaagagttggat
cgtgctcaggagcgtctgacaactgccctgaccaagctggaggaggctgagaaggcggct
gatgagtctgagagaggcatgaaggtcattgagaacagagcctccaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgccgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatctggagcgtacagag
gagcgcgctgaactttcagaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccagtctgagaagtactcacataaggaggacaag
tatgaggaggagatgaaggtcctcaccgacaagctgaaggaggctgagacacgtgctgag
ttcgctgagagatcagtaaccaagcttgagaagaccattgacgacttggaagagaaactg
gcacatgctaaagaggagaaccttgatatgcaccagatgctggaccagactctaatggaa
ctaaataacatgtga

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