Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139403168
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Entry
139403168 CDS
T10872
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03030
DNA replication
ocla03410
Base excision repair
ocla03420
Nucleotide excision repair
ocla03430
Mismatch repair
Brite
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139403168
DNA Replication Termination Factors
ELG1-RFC complex
139403168
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139403168
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139403168
Check point factors
HRAD17(Rad24)-RFC complex
139403168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139403168
NCBI-ProteinID:
XP_071002973
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLHIEHQTVTAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTMAQSQQ
IQTSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIGPIRSRCL
AVRVPLPSTEEVCNVLSTVCRKEGLLLPAELAKQISEKSGRNLRKALLMCEACRVQQYPF
SADQDIPETDWEVYLRETANAIVSQQSPQRLLEVRGRLYELLTHCIPPEIIMKGLVTELL
GNCDGQLKAEVTHMAAHYEHRLQQGNKAIYHLEAFTARFMAIYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggacaaatacagaccgacttctctggggaaactggactaccacaaa
gaacaagcaaatcagctgaaaaacctggtccagtgtggggacttccctcatctgttggtg
tacgggccgtctggagcagggaagaagactcgtatcatgtgtctgctgagagaactgtac
ggagccggagtggagaaactacacatagaacaccagaccgttacggctccctctaagaag
aagattgagatcaacaccatagccagtaactaccacctggaggtcaacccaagtgatgct
ggtaacagtgaccgtgtggttatccaggaactgatcaagactatggcccagtctcaacag
atccagaccagcacccagagggagttcaaagttgtcctgttgacagaggtggaccgcctc
actaaggatgcccagcatgcattgcgtcgtaccatggagaagtacatgtccacctgccgg
ctcatcctctgctgtaactccacctccaaagtcattggaccaatcaggagcaggtgtctg
gccgtcagggtgcccctgcccagtacagaggaggtgtgtaatgttctgtctacagtgtgt
aggaaggagggtctgcttctccccgctgagttggccaaacagatatcagagaagtctgga
cgcaacctccgcaaagcactgctgatgtgtgaggcctgcagagtgcaacagtacccgttc
tcagcagaccaggacatcccagagaccgactgggaggtttacctgagagagacggccaac
gccatcgtcagtcagcagagtcctcagaggttgttagaggtgagggggagactgtatgag
ttgctgactcactgcattcctcctgagatcatcatgaagggcctggtaacagagctgcta
ggtaactgtgacggccagctgaaggcagaggtgactcacatggcagcccactacgaacac
cgactgcagcagggcaataaggccatctaccacctagaggctttcaccgccaggttcatg
gccatctacaagaagttcatggaggacggactggacgccatgatgttctga
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