Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139403885
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Entry
139403885 CDS
T10872
Name
(RefSeq) tetratricopeptide repeat protein 17-like isoform X1
KO
K24931
tetratricopeptide repeat protein 17
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139403885
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Other cilium assembly proteins
139403885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_7
TPR_12
TPR_14
TPR_8
TPR_19
TPR_11
CFAP70_mid_TPR
TPR_16
RMD1-3
CFAP70_TPR_C
ChAPs
ARM_TT21_N
TPR_9
TPR_YpiA
Motif
Other DBs
NCBI-GeneID:
139403885
NCBI-ProteinID:
XP_071003175
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MADLRKISSGSLPYVNVSRKVSVQGKIFILLCIILAEPGGATTHWVVTEDGKIQQQVDSP
LNLKHPHDLVIFMRQETRVNYLKKLEKQLVAQKIHIEENEDRDTGLEQRHYKEDADCVMA
KVPLGDLDLYDGTYISLESKDISPEDYVDFRSPLPPDLEKPDCARVFELPYSIHGFQHLR
GVQEQVNLTSPLLSKEDPIFGSLSHKLGRSMDEVGHHIQQGLLRNSSSWVLYNLASFYWR
IKNEPRRAVDCVIRALHFSPRQHKDLALVNMANILHRAHFSADAAIVAHTALDLTSDLLT
SHYTLGNIYAMLGEYNHSVLCYEQALQAQPGFEQALRRKHAVLCQQKLEQRLEAQHRSLQ
RTLNELKEYQKQHDHYLRQQEALDQYRLLQEEQILRNIIHETQMAKEAQLGNHQMCRLGQ
QQSSLFCPLDLPVRYHRGDLFEHVHHIQFGEEVSVAGSVALVSEPSTNQTTSSHLHPSVS
GDPEPAALWGHQASPTEDIQRLLWPRRADCADEFPVIPPAHLLPTFYLPPETQGPSLQTV
LYGTGPPPSSLASPDCGPVLQPPPADLPASVGWTLEDKELPDPHATQVLLSRSRGWSLEQ
AGASIAQAMKKASAPGWLLQNEAALFWRAKGNGTSSLQCLRHSLASAPPTQRHLPLVNAA
NLLLRHGLSAQAHTLLEDALALNASEPHTLLSLVSVNLAQGNVTGALDLFRQTLALSASC
AQCRASLPLLRCLQFYPFLYNLQRSPCPQGALCVGEEDVTLHLDEWEAGSRQKQQEDPTT
TAAQALPVSTVEEALLFEKVVLDSNGSGEASQQPGGGERDEEEWQLKEELMGAFEGAMDV
GGKRGDLRGIRVLKNDRVMGAGRSGGGPCFGNCEDDEGAEWITFQVKRVRKPKADSPEVW
GSAEDTLQGETLLPGGHSVLEISGPTIPSPGPSGRWRDYTGLGWPGPEECQRTRRVDLTT
VASTWLAVSAKNIDITEHIDFTTPLQEPAVEPLCNANLAASMHTLDHLAGVANRAAIHYT
GESQLREVLQNLGKDKFSPQSFEQVGTRIAKVLEKNQTSWVLSSMSALYWRVKGQGKRAI
DCLRQALHYAPHHMKDVPLISLANIFQNARLWEDALTVARMAVEIAPHFVVNHFTLANVY
IAMEEFEKAMRWYESTLELQPEFAPAKDRLRTIQCYLLTKKDRRLP
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcaggaaaatcagttctgggtctctgccctatgtaaacgtttcccgaaaa
gtgtcagttcaagggaagatttttatcctactctgtataatattggccgaacccggagga
gctaccacccactgggtcgtcactgaagatggaaaaattcaacagcaagttgactctcct
ttaaatcttaaacatccacatgaccttgtcatcttcatgcgacaggagacccgtgtcaac
tacctgaagaagttagagaagcagcttgtcgctcagaagattcacattgaggagaatgag
gacagggacacgggcttggagcagaggcactataaagaggatgccgactgtgtcatggct
aaagtacccctgggagacttggatctctacgatggtacctacatctccctggagagtaaa
gacatcagccctgaggattatgtagattttaggtcccctctacccccggatctggagaag
cctgactgtgccagagtatttgagctcccatatagtatccacggtttccagcatctccgg
ggcgtgcaggaacaggtgaacctcacttctcctctgctctctaaagaggaccccattttt
ggctccctgtcccacaaactgggccgcagcatggatgaggtgggccatcacatccagcag
ggcctgctgaggaactcctcatcctgggtgctgtataacctggcgtcgttctactggagg
ataaagaatgagcccaggcgggcggtggactgtgtgatccgggccctgcacttctcaccc
aggcagcacaaggacctggccctggtgaacatggccaacatcctgcatcgggcccacttc
tcggctgacgctgccatcgtggctcacactgccctggatttgacctctgaccttctcacc
agccactacaccctgggcaacatctacgcaatgctgggggagtataaccactcagtgctg
tgctatgagcaggctctccaggcccagccgggctttgagcaggccctgaggaggaagcac
gccgtcctctgtcagcagaaactggagcagcgcctggaggcccaacacaggtctctgcag
cgcacgctgaacgagctgaaggaataccagaaacagcatgaccactacctgcgtcagcag
gaggccctggaccaatacaggctgctgcaggaagagcagatcctccgcaacatcatccac
gagacccagatggccaaggaggcacagctgggcaaccaccagatgtgtcgtctgggccaa
caacagagcagcctgttctgccccttggacctgccggtgcgttatcaccgtggagacctg
tttgagcacgtccaccacatccagtttggagaggaggtctctgtggcgggcagcgttgct
ctggtgtcggagccgagcaccaaccagaccaccagctcacacctccacccctccgtgtcc
ggagaccctgagcctgcagccctctggggccaccaggcctcccccaccgaagacattcag
aggctgctgtggcctcggagggcagactgtgctgatgagtttcctgtcatcccccccgcc
cacctactacccaccttctacctcccacctgagacacagggccccagcctgcagacggtg
ctgtacggtaccggaccccctccctcctccctggcttctccagactgtggccctgtgctc
cagccccctccagctgaccttcctgcctctgtgggctggaccttggaggacaaggagctg
ccagaccctcacgccacccaggtactgctgtctcgcagcagaggctggagtttggagcag
gctggtgccagcatagcccaagccatgaagaaggctagcgcccctggctggttgctccag
aacgaggcggcgttgttctggcgggcgaagggtaacggtaccagctcgctgcagtgtctg
cgccactccctggcctcggctccgcccacccagcgccacctgcccctcgtcaacgctgcc
aatctgcttctgcgccacggcctcagcgcccaggcacatactctgctggaggacgccctg
gcactcaacgcctctgagccccacactctcctgagcctggtgagcgtgaatctggcccag
ggcaacgtgacgggcgccctggacctgttccgccagaccctggctctctctgccagttgt
gcccagtgccgtgccagcctgccccttctgcgatgcctgcagttctacccattcctctac
aacctgcagcgctcgccatgtccgcagggtgctttgtgtgtcggtgaggaggatgtgact
ctacatctagatgaatgggaggctggcagtagacagaagcagcaggaggaccccaccacc
acggctgcccaggctctgcctgtctccacagtggaggaagccctcctgtttgagaaggtg
gtgctggacagtaacggctctggagaggcaagccaacagcctggaggaggagagagggat
gaggaggagtggcagctgaaggaggagctgatgggagccttcgagggggctatggacgtg
gggggcaagcgaggcgacctgaggggcatccgcgtgctgaagaacgaccgggtgatggga
gcgggccggagcggaggagggccctgcttcgggaactgtgaggatgacgagggggctgag
tggatcacattccaggtgaagcgtgtgaggaagcccaaggcggacagccctgaggtctgg
ggcagtgctgaggacaccctgcagggggagacactgctccctggaggccactctgttctg
gagatcagcggccccaccatcccttcccccgggccctcagggcgatggagggactatacc
ggtctgggctggccggggccagaggagtgccagcgaacacgcagggtagacctcaccacc
gtggccagtacctggctggccgtgtctgccaagaacatcgacatcacggaacacatagac
tttaccactccactccaggagcctgcggtggagccattgtgcaacgccaacctggctgcc
agcatgcacaccctggaccacctggctggcgtggccaaccgcgccgccatccactacacc
ggagagagtcaactcagagaggttctacagaatctgggcaaagataaattctcccctcag
tcctttgagcaggtgggcacgcgcatcgccaaggtcttggagaagaaccagacatcgtgg
gtcttgtccagcatgtctgctctctactggagggtgaagggtcagggcaagagggccatc
gactgcctacgccaagccctccactacgccccgcaccacatgaaggatgtacctctgatc
agcctggccaacattttccagaacgcgcggctgtgggaggacgctctgaccgtggcccgc
atggctgtggagatcgccccgcacttcgttgtcaaccacttcaccctcgccaacgtctac
atcgccatggaggagtttgagaaggccatgcgctggtatgagtccactctggagctgcag
ccagagtttgcccctgccaaggaccgcctgagaaccatccagtgttacctgctaaccaag
aaggaccgccgtctaccctga
DBGET
integrated database retrieval system
