Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139403954
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Entry
139403954 CDS
T10872
Name
(RefSeq) protein jagged-1b-like
KO
K06052
jagged-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
ocla04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139403954
04371 Apelin signaling pathway
139403954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139403954
CD molecules [BR:
ocla04090
]
Proteins
139403954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
JAG1
EGF_DL_JAG
DSL
EGF_2
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
EGF_PEAR1L
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
139403954
NCBI-ProteinID:
XP_071003267
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
GDGQVIEKASHSGMINPSHQWQKLSHNGPIGQFDYQIRVSCDEHYYGFGCNKFCRPRDEF
FGHYTCDYNGNKTCLEGWSGLECNTPICRQGCSTEHGHCKEPDDCKCLYGWQGQYCDQCN
PHPGCIYGTCVEPWQCLCDTNWGGHLCDKDLNFCGTKQPCLNGGTCSNTGPDKYQCSCVE
GYSGVNCERAEHACLSNPCSNGGSCVETSQGYGCECGAGWSGPSCSINVDECSPNPCNHG
GTCQDLVHGYKCHCPPQWTGKTCRIDANECDSKPCVNANSCRNLIGGYFCECDAGWTGLN
CDINLNDCKDQCHHGGTCMDLVNGYRCVCPAGYSGDHCERDVDECAGAPCLNGGRCQDQV
NGFTCLCLAGFSGHFCQLDIDYCFANPCQNGALCFNVAKDYYCGCSEDYEGKNCSHLKDH
CHTTTCKVIDSCTVAVGSNSTPGGERYISSNVCGPHGRCRSQAGGQFSCDCQEGFRGTYC
HENINDCESSPCGTGGTCIDKVSVYQCICGDGWEGDHCEINIDDCSTSPCHNGGTCQDLV
TDFFCECMNGWKGKTCHSRESQCDEVTCNNGGTCHDEGDTFQCKCSPGWEGATCNIAKNS
SCLPNPCQYGGTCVTSGDSFTCVCKEGWEGDTCEQNTNDCNPHPCYNSGTCVDGDNWYRC
ECTPGFAGPDCRININECQSSPCVFGATCVDEINGFHCLCPQDRSGPRCQDVTGRPCSGN
SRVTPDLAKWDEDCNTCQCFNGKVVCTRMWCGLRSCRVSGGVKGHGSRGGGVGCLSGQSC
VPIREEQCFIRPCLGQGECHPSSPPPNKCHPSSGYHDNSCANVTLTFTKETMPRGLSIEA
VCKQLRQLYVVKNVSSEYSVSITCDPSTSASNEIHLSIYTVDQWMDRSPIKEITERIIDL
VSKRHGNNSIITAIAKVRVQRTPSTSHTDYMVPLLSSVFIVLWILVLVSVFLYCMRRRRK
HGNGASSSAATDDNTTNNVREQLNQIKNPINVKHASSGHLTTSVVIKDYEDKNLIVAKVR
THHRPEGEEDDDEERQLGNKGRFVVTAKQPAYTLVEREDQGLNGGLGANGPSDGDVRTAV
QPSDGDVGTAVQHRSKHPNWINKQDNRALETPHSINQMDYNRALETAHSINQMDYNRALE
TAHSINRMDYNRALETAHSINRMDYIV
NT seq
3506 nt
NT seq
+upstream
nt +downstream
nt
gtggtgatggtcaggtgattgagaaggcatcccactctgggatgatcaaccccagccatc
agtggcagaagctcagccacaacggtcctattggtcagtttgactatcagatccgggtca
gctgtgacgagcactactatggcttcggatgcaacaagttttgccgaccccgagacgagt
tcttcgggcactacacctgcgactacaacgggaataagacctgtctggagggctggtctg
gactagaatgtaacacacctatctgtcggcagggctgcagtacagaacatggacactgca
aagagccagatgactgcaagtgtctgtatggctggcaggggcagtactgtgaccagtgta
atcctcaccctggctgtatctatgggacctgtgttgaaccatggcagtgtctgtgtgata
ccaactggggaggacatctctgtgacaaagatctgaacttctgtgggaccaaacagccct
gtctgaacgggggaacctgcagcaacacgggacctgacaaataccagtgttcctgtgttg
agggctactctggagtcaactgtgagagggcagagcatgcgtgtctgtccaacccctgct
ctaatggagggagctgtgtcgagaccagtcagggttatgggtgtgaatgtggagcgggtt
ggagcggaccctcctgtagtatcaatgttgatgagtgctctcctaacccctgtaaccacg
gtgggacctgtcaggatctggttcatggttataagtgtcactgtcctcctcagtggaccg
gcaagacctgtcgcatagatgccaacgaatgcgacagcaagccctgtgtcaacgccaact
cctgccgcaacctgattggtggatacttctgcgagtgtgacgctggttggacagggctga
actgtgacatcaatctcaacgactgtaaagaccagtgccaccacggaggaacctgcatgg
acttggtgaacgggtaccgctgtgtgtgtcctgcgggttactctggagaccactgtgaga
gagatgtggatgagtgtgccggcgctccctgtctgaacggcgggcgatgccaagaccagg
tcaacggattcacctgcctctgtctggccgggttctctggacatttctgccaattggata
tagactactgcttcgccaacccttgtcagaacggggctctatgcttcaacgtggctaaag
actactactgtggctgttcagaagactacgagggaaaaaactgctctcacctcaaagacc
actgtcacaccaccacgtgcaaagtgattgacagctgcacggttgccgtgggatccaaca
gtacccctggaggggagcggtacatctcctccaacgtgtgtgggcctcacggacgctgtc
ggagccaggctggaggacagttcagctgtgactgtcaggagggcttcagaggcacatact
gtcacgagaatattaatgattgtgagagcagcccgtgtggtactggaggaacctgtatag
ataaagtcagtgtgtaccagtgtatctgtggagacggctgggagggggaccactgtgaga
tcaatatagatgactgcagcactagtccatgtcataacggaggaacatgtcaagacctgg
tgactgatttcttctgtgagtgtatgaacggctggaaggggaagacctgccactcccgtg
agagccagtgtgacgaggttacctgtaacaatggagggacatgtcatgatgagggagaca
ccttccagtgcaagtgttcccctggatgggagggggctacctgtaatatagctaagaaca
gcagctgtcttcctaacccctgtcagtacgggggaacctgtgtgaccagcggggactcct
tcacctgcgtctgcaaggagggctgggagggagacacctgtgaacagaataccaacgact
gtaatccccacccatgttataacagtgggacctgtgtggatggtgataactggtatcgat
gtgagtgcactccagggttcgctgggccagactgcaggatcaatatcaacgaatgccagt
cctcgccgtgtgtgtttggtgctacctgtgttgatgaaatcaatggcttccactgcctgt
gtccccaagaccgatcaggaccacgttgtcaggacgtgacagggagaccgtgctcaggga
acagtcgtgtcacccctgatttagccaagtgggatgaggactgcaacacctgccagtgct
ttaatgggaaggttgtctgtactcgaatgtggtgtggtcttaggtcctgccgagtcagcg
ggggggttaaaggccacggtagcagaggaggtggggtcgggtgtctgtctggtcagagct
gtgtaccaatcagggaggagcagtgtttcatccgaccgtgtctgggtcagggggagtgcc
acccctcctctccaccgcccaacaaatgccaccccagctccggttaccacgacaacagct
gtgctaacgtaacacttacgttcaccaaagagaccatgcccaggggtctgagtattgagg
cagtgtgtaagcagctgagacaactgtacgtggtcaagaatgtgtcctctgagtattctg
tttccataacctgtgacccttcaacctccgccagcaacgagatccatctcagcatctaca
cagtggaccagtggatggacagatcacctataaaggagataacagagaggataatcgatc
tggtgtctaaacgccatggcaacaacagcatcatcacagccattgccaaggtcagagtgc
agcggacgccgagcactagccacaccgactacatggtccccctcctctcttcagtcttca
tcgtcttgtggatcctggtgctggtctccgtcttcctgtactgcatgcgtcgccggcgga
aacatggcaacggagcctcgtcgtccgcggcgacagatgacaacaccaccaacaacgtcc
gcgagcagctcaaccagatcaagaatcccatcaacgtgaaacacgccagcagcggccatc
ttacgacgtcggtggtcatcaaagactacgaggataaaaacttgatcgtcgccaaggtac
gaacacaccaccgccctgagggggaggaggacgacgatgaagagagacagctagggaata
aaggacgctttgtggttacagccaaacagcctgcctacacactggtggagcgggaggatc
agggcctcaatggaggcctgggggccaacgggcccagcgacggggacgtcaggaccgcgg
tgcagcccagcgacggggacgtcgggaccgcggtgcagcaccgctccaaacaccctaact
ggattaataaacaggacaacagagccctggagacgccacacagtatcaaccagatggact
acaacagagccctggagacggcacacagcatcaaccagatggactacaacagagccctgg
agacggcacacagcatcaacaggatggactacaacagagccctggagacggcacacagca
tcaacaggatggactacatcgtatag
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