KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404363
Entry
139404363         CDS       T10872                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139404363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139404363
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 related factors
    139404363
 Complex B
    139404363
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus RRM_1 zf-CCCH_2 EAD6
Other DBs
NCBI-GeneID: 139404363
NCBI-ProteinID: XP_071003316
LinkDB
Position
3:75243480..75263768
AA seq 226 aa
MHFSNENLGWKFTNFRVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTA
QSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEMNVCDNLGDHLVGNVYLKFRREEDAEKA
VMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY
GRRRKKGGGHRSRSRSRERRSRSRDRGRGGGRDRERRRSRERSGRF
NT seq 681 nt   +upstreamnt  +downstreamnt
atgcatttcagcaatgagaatttggggtggaaatttacaaatttcagggtgaactgttct
ttctactttaaaattggtgcctgccgacatggtgaccggtgctccagattacataataag
ccaactttcagccagaccattgccctcttgaacatttaccgtaaccctcaaaacactgcc
cagtctgccgatggtttgcgctgtgccgtcagtgatgtggagatgcaggagcactacgat
gagttctttgaggaggtcttcacagagatggaggagatgaatgtgtgcgacaacctggga
gaccatctggttggaaacgtatacctgaagttccgtcgtgaggaagacgcggagaaggcc
gtgatggatctgaataaccgttggttcaacggtcaaccaatccacgccgagctctctccc
gttacagacttcagagaagcctgctgccgccagtacgagatgggggagtgcactcgagga
ggcttctgtaacttcatgcacctgaaacccatctccagggagctgaggagggagctgtac
ggtcgccgcaggaagaagggagggggccatcgttctcgctcccgttccagggaacgccgt
tctcgctcgagggatagaggcaggggaggcggacgtgaccgcgagagaaggcgttccaga
gaacgctctggcaggttctaa

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