Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404536
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Entry
139404536 CDS
T10872
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139404536
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
139404536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139404536
NCBI-ProteinID:
XP_071003339
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MGCNLCSLQKREEHYKLLYEISQVNGRDYSKASHDEMVEVIRRDPIVVQVVRRHGNPAHS
HQTLQEVHVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTMEHEFYE
CPEYLSNTPAEVDRPEEFEYEQVELCRLNSQEKLGLTLCYRTDDEEDTAIYVSHVGPNSI
AARDGRIREGDRILQINGCDVQDRQEAFTLLSNEESRSIVLLVTRPEEAWLDEEHNELLE
ELKMEILEERRNEEVQKTGGGEEQAKQLEEDDVMTDTATCSSNTQDKDSGLGTGRNEESS
EQEVLLARVHRRPAQGLRDRWRAKHGQGLGRRVVVPSDTQGPRGLIQAQEGEGGVGLGLE
CDSRFKQLLELKCQIRNSGECGVYYSRRSTIECSLTEQSGVGVSGGGGMEQELRMLNDEL
RSIELECQSIMQAHQLRRSPKHGREQHAKLADINEHPGERQWDSDKLRGDKDSSSAYNTA
ESARSTPLGMERSPDHSLQRRISLTNQKNLRSTMAVSGQSISIPIPDSRQDPNPSPGTTV
ISSSPDQSNPSPSESDPALPADDERCDRTRSHRGPRRAPPYPSPYHTAPQQGASPAHARH
LQSYMQQLLQQTSSLETYSQSQLSLLSVCRDRSTRPGEPRLEWKVKVRADGTKYVARRPA
RDRILRERALRIREERSGGMTTDDDTMSEMKMGRYWSKEERKQQLARAREQRRRREYMQR
SRLECLREGPGSGAEGRKEVNILELSHKKMMKKRNKKILDNWMTIQELMSHGARAPEDQG
TKQVHNAFLSVTTV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgctctttacagaaacgggaggaacactacaagctgctgtatgag
atttcacaggtgaatggcagggactactccaaggccagccatgacgagatggtggaggtc
atcagaagagaccccattgtggtgcaggtcgtccgtcgccatggcaaccccgcacattca
catcagacattacaggaagttcacgtggtggacgtgtgcacgcagacggacatcactttt
gaacacatcatggccctggctaagctgaggcctgctactccacctgtacccgacatctgc
ccctttctgctgtcagacagctgtcactccatccacaccatggagcatgaattctacgag
tgtccagagtacctctccaacaccccagctgaagtggacaggccagaggagtttgagtat
gagcaggtagagctctgtcggctcaacagtcaggagaagttgggtctgacgctgtgctat
cggactgatgatgaagaggatacagctatctacgtcagccacgttggacccaacagcatt
gctgccagggacgggcgcattagggaaggagatcgaatattacagatcaatggctgtgac
gtacaggacaggcaggaagctttcactctcctgtccaatgaggagtccaggagtatcgtt
ctcctggtgaccagaccagaggaggcgtggttggatgaggagcacaatgaactcctagag
gagctgaagatggagatccttgaggagaggaggaacgaggaggtgcagaagacaggagga
ggagaggagcaggccaaacagctggaggaggatgacgtcatgacagacacggccacgtgt
tcctccaatactcaggacaaagacagcggcttggggacggggcgcaacgaggagagctcc
gaacaggaagtcctcctagcccgtgtccaccggaggcctgcccagggcctgagagaccga
tggagggccaagcatggccaggggctgggcaggagggtggtggtaccctcggacacccag
ggacccaggggtctgatccaagcccaggagggtgagggtggagtggggttaggactggag
tgtgacagccgcttcaagcagctcctggagctcaagtgccagatccgtaacagcggggag
tgtggtgtgtactatagcaggagaagcaccatcgagtgcagcctgacggagcagagcggg
gtgggggtcagtggtggtggagggatggaacaggagctgaggatgttgaacgatgagctg
aggagtatcgagctggagtgtcagagcatcatgcaggcccaccagctccgacgaagcccc
aaacatgggcgtgagcagcatgccaagctggccgatatcaacgagcatccaggggagagg
cagtgggacagcgacaagctaaggggggacaaggacagctccagtgcctataacacggct
gagagcgccaggtccactcctctaggcatggagagatccccagaccactctctacagaga
cgcatcagcctcaccaaccagaagaacctccggagcaccatggcagtctccggccagtcc
atctccatccccatcccagacagccgacaggatcccaaccccagccctggaaccacggtc
atctccagcagccccgaccagtccaacccttccccctccgagtcagacccggccctgcct
gcagacgacgagcgctgcgaccgcaccaggagccaccgggggccacgcagggcccctccc
tacccgtccccttaccacacagccccccagcagggcgcctctccagcccacgccagacac
cttcagagctacatgcagcagctcctccagcagacctccagtctggagacctactcccag
tcccagctcagcctcctcagcgtctgccgagaccgctccactcgcccgggggaaccacgc
ctcgaatggaaggtcaaagttcgagccgacgggacgaagtatgtagcccggcgaccggcg
agggaccggattctacgagaacgggcgctgaggatcagggaggagcgtagtggagggatg
accacggacgacgacactatgtccgagatgaagatggggcggtactggagtaaagaggag
agaaagcagcagctggccagagccagggagcagaggaggaggagggagtacatgcagagg
agccggctggagtgtctcagagagggccctgggagcggggccgagggccgtaaagaggtc
aacatcctggaactcagccacaagaagatgatgaagaaacgcaacaagaagatcctggat
aactggatgaccatacaggaactaatgagtcacggggccagagcacctgaggaccagggg
actaaacaagtacacaatgccttcctgtctgttactacagtatag
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