Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404678
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Entry
139404678 CDS
T10872
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum-like isoform X1
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139404678
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139404678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
zf-met
PRIMA1
Motif
Other DBs
NCBI-GeneID:
139404678
NCBI-ProteinID:
XP_071003426
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All DBs
Position
1:complement(30232834..30327300)
Genome browser
AA seq
1475 aa
AA seq
DB search
MSKDSRNDGRRRGQHRFGIRIGQGGDGRERSGSNSSGSSHGGGKSRNTPITVALKASFRR
SNSHDKVRKIVAEEGRAARNLIAWSVPLENKEEEGKSKTHTNANLRNQRINSGLHRNKKQ
NTGLDNKSTAGALLDKGAEKSPTKARQPRKVDLRARYWAFLFDNLRRAVDEIYVTCESDQ
SVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQNRPTSLAWEVRKMSPGHHVMPS
PSSDRIVHSPSARRALNFGGPPPTLAVARLSHTGPSWADRVKSSQSLPVPSEVNNYPAEK
PGKKDSEGWETVQRGRPARPRSAAIVAKVSPVLAHISPKDDINKENQQPPGRPCPLDKDE
GQCEQPIPEEPDPLVEMTGDLEKGHMMEPPSDSAQDSGQCVNPPCEDAPPPIPAPTLYLT
QDPDPTIFPALSLPVPALALPPSLDSAQTDGPCALGDKGTAGGTSQGMATSAPGPAEAPM
AAVKLESVLDPKELSTPQSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIQAEN
NDLETDNESDFSASIGSGGGFNMDWSDMLADYDDSPLSAAREPWRQSTSWGDIVEEEPSR
PPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQLKAQQLRDKLRDEKTHKLQKLLEREKEV
RKWKEELLDQRRRMMEEKLLHAEFKRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRH
DVLAKLNEYEQRLNELQEERGRRQEEKQARDEAVQERKRALEAERQARVEELLMRRKEQE
TRIEQQKQEKERAREDAARERARDREERLAALSAAQQEAMEELQKKIQMKHDESSRRHME
QIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVVITTEVHLYSHTKGKRHQQA
VRDSSSIQGRELSDEEVEHLSLKKYIVDIVTDNTVSSESVKDGEERQKARKKAKKLRTRM
NSRAKEYETSMEAKTVPDSPYKAKLQRLVKDLVKQLQGQDSGQWANTRVSGLDRTLGEIS
RILEKRNNEDQVAFQVGGGLSTLEQILQVVTATSTPTSRIPIKSLCAAINTYYLACSRCH
LNCTYVIFSNKIAFLMDLLLHQLTLFVPDEDKTIFGCSVNKQVFEGLTTGLLQTSATVLS
LLRPYVPDCGRGDAPRIMSPDTKTSPIEPFNTRAQDLISYVVNMGLIDKLYSCFLSVQGP
VDESPKMSAFLQQATALLHAMCKLCFAVTGRSPSIFDNKRTDPTGLTALLQSTDLVGVVH
TLYCILLHSSALPEPAAQGPQEPYAPGVIQVALTGLRFLNSFALLDLSAFQTVLGAEGLS
LAFRHIVSSLLWYCSQHSSEELLQEVIICVGYFTVNHPDNQVIVQSGRQPSVLQKLCQLP
FQYFSHPRLIKVLFPSLISACYNNPQNKVILQQEMSCVLLATFIQDGASSENHPDNRMQQ
GDRVSQTLDYCELSDRFPRDQWESALQFFLKKQED
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagacagtcgcaacgatggacgacggcgtggccagcaccgattcggtattaga
attggacaaggcggggacgggagggagaggtctggcagcaacagctcagggtcctcgcat
ggaggaggaaaaagcaggaatactccaataaccgttgccttgaaggcatcctttcggcgg
tcaaacagccatgacaaggtgaggaagattgtggcagaagagggccgtgctgcgagaaat
ctcattgcctggagtgttcctctggagaacaaagaggaggaagggaagtccaagactcat
acaaacgccaatttgaggaatcagagaattaactctggactgcataggaataagaaacag
aatacaggcctggacaacaagagcacagccggggccttgcttgacaagggagcagagaag
agtcccaccaaagccaggcagccgcgcaaggtggacctgcgagcacgatactgggccttc
ctcttcgacaacctgcggcgggcagtggatgagatctatgtcacctgtgaatctgatcag
agtgtggtggagtgtaaggaggtgctgatgatgttggacaactatgtgcgggactttaaa
gctctgattgactggatccagctgcaggagaagttggagaaaacagatgcccagaacaga
cccacgtctttggcttgggaagtgcgtaagatgtccccaggtcatcatgtgatgcccagc
ccctcatctgacagaattgtccactcacctagtgctcgccgcgccctaaactttggtggt
cctccacccacactggccgtagctcgtctgtcccacacgggccccagctgggctgaccgg
gtcaagtcctcccagtcccttcctgtccccagcgaagtcaacaactatcccgcagagaaa
ccaggtaagaaggactctgagggctgggagacagtacagcgcgggcgtccggcacggcct
cgctctgccgccatcgtagcgaaggtcagcccggtgctggcccacatcagccctaaagat
gatatcaacaaggagaaccagcagccccctggcaggccctgccccctggacaaagacgag
ggtcagtgtgaacaaccaatccctgaggagcccgaccccctggtggagatgacaggagac
ttagagaagggtcacatgatggagcccccatcagacagtgcgcaagactctgggcagtgt
gtcaacccaccctgtgaggacgcgcctccccccataccagcccctaccctttaccttacc
caggacccagaccctacgatattcccagccttatccctaccagtccctgccctagctctc
cctccatccctagactcagcccagacggatgggccctgtgctctgggggacaaggggact
gcggggggcacgtcacagggcatggcaacatctgctccaggaccggctgaggctcccatg
gcagcggtgaaactggagagtgtgctggaccccaaagagctttccactccccagtccatg
gcagaggtcctggcaaagaaggaggagctggctgaccgcctggagaaggccaacgaggag
gctatcgccagcgccatcgctgaagaggaacagctgaccagagagatccaggctgagaac
aatgacctggagactgacaatgaaagtgacttctctgccagcattggcagtggaggtgga
ttcaacatggattggagtgacatgctagccgactatgacgactcgcctctctctgcagcg
cgggagccgtggcgtcagagcacctcctggggggacattgtggaggaggagccttccaga
ccacctggccatggaatccacatgcacgagaaactgtcctccccatctcgcaaaagaacc
atcgcagagtctaagaaaaaacatgaagagaagcagctgaaggcccagcagctccgggat
aaactgcgagatgagaagacccacaaactgcagaagctcctggagagggagaaggaggtc
aggaaatggaaggaggagttgttggaccagcggcggaggatgatggaggagaagttactc
catgcagagttcaagcgggagctgcagctccaggccatagtgaagaaggctcaggaggag
gaggccaaggtgaatgagatagcattcatcaacactctggaagctcagaacaagaggcac
gatgtgctggccaagctgaacgagtacgagcagcgcctcaacgagctgcaggaggagaga
ggcaggagacaggaggagaagcaggccagagacgaggctgtacaggagcgtaagcgggct
ctggaggcagagcggcaggcacgggtggaggagctgctgatgaggaggaaggagcaggag
acacgcatcgagcagcagaagcaggagaaagagagggccagggaagacgctgcacgagag
agggccagagacagagaggagcgtctggctgccctcagcgctgctcaacaggaggccatg
gaggaactgcagaagaagatccagatgaagcatgatgagagcagtcgcaggcacatggag
cagattgaacagaggaaggagaaggcagcagaactcagcagtggcagacatgccaacact
gactatgcccccaaactgacaccgtatgagcgcaagaaacagtgctccttgtgcaatgtt
gtgatcaccacggaggtgcacctgtacagccacaccaagggcaagaggcaccaacaggcc
gtgagagacagcagcagcatccagggacgcgagctctcagacgaggaagtggagcatctt
tccttaaagaagtacatagtggacattgtgacggacaacactgtctcctctgagagtgtg
aaggatggagaggagaggcagaaggcacgcaagaaggcaaagaagctccgcacacgcatg
aactccagggcaaaggagtatgagacgtcaatggaggcaaagacagtccccgactcccca
tacaaggccaagctccagcgtctggtgaaggacttggtcaagcagctccagggccaagac
agtggtcagtgggccaacaccagggtgtcaggcctggacagaaccctgggagagatctcc
cgcatcctggagaaacggaacaatgaagatcaagtggcattccaggtgggagggggactt
tctactctggaacagattctgcaggtagtcactgcaacctccacccccacctcacgcatt
ccaatcaagtctctatgtgctgcgataaacacctactatctggcatgctctcgttgccac
ctcaactgcacatatgttatcttcagcaacaagatagccttcctcatggacctgctgcta
catcagcttacactgttcgtcccagatgaagacaagaccatatttggttgcagtgtgaac
aagcaggtgtttgagggactgaccaccggcctgctgcagaccagcgccactgtcctgagc
cttctccgtccctatgtccctgactgtggccgcggggacgcccctcgcatcatgtcacca
gacaccaagacctcccctatagagcccttcaacacccgcgcccaggacctcatcagctat
gtggtaaacatgggtctgattgataagctgtacagctgcttcctgtctgtccagggccca
gtggacgagagccccaagatgtctgccttcctccagcaggccaccgctctgctgcacgcc
atgtgtaagctgtgcttcgctgtgaccggccgctctcccagtatatttgacaacaagcgt
acagaccccacagggctgacggccctgctgcagtccacagacctggtgggtgtggtacac
actctgtactgcatcctgctccacagctccgccctgcctgagccggctgcccagggccca
caggagccctatgccccaggggtcatccaggtggccctaacgggcctccgcttcctcaac
agcttcgccctgctcgacctgtctgccttccagactgttctaggtgccgagggcctgtcc
cttgctttccgccacatagtgagctccctgctgtggtactgctctcagcactcctctgaa
gagctgctgcaggaagtcatcatctgtgtgggctacttcaccgtcaaccaccctgacaac
caggtgatagtgcagtctggccgccagcccagcgtgctgcagaaactgtgtcagctaccc
ttccagtacttcagccacccgcgcctcatcaaagtgctcttcccttcactcatctcagcc
tgctacaacaatccccagaacaaggttattctgcagcaggagatgagctgtgtgctactg
gccaccttcatacaggacggtgcctcaagtgagaaccatccagacaacagaatgcaacaa
ggagacagagtctctcagacactggattactgtgagctgtccgaccgctttcccagagac
caatgggaatcagcactgcagttcttcctcaagaagcaggaggactaa
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