Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404712
Help
Entry
139404712 CDS
T10872
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139404712
04082 Neuroactive ligand signaling
139404712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139404712
Ion channels [BR:
ocla04040
]
Ligand-gated channels
GABA-A
139404712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
BACK_BTBD8
Motif
Other DBs
NCBI-GeneID:
139404712
NCBI-ProteinID:
XP_071003445
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MGDGMRCGCAMSKVWVFVLLVSVTCRLSLSQTPAVTTTEPLKEAELNDNITIFTRILDRL
LDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFQGPMK
MLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQ
LEDFPMDAHACPLKFGSYAYPVSEVVYSWTQGAAKSVVVAEEGSRLNQYHLIGQTAGTED
IYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTT
VLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKA
MEDTRKKNPTALSKKPNNTCSAGVSYTPNLTKDNAISTISNSADIQLKLAEVKTPDPKKT
YNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAVNPYT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgggatgcgctgcggctgtgctatgtccaaagtctgggtcttcgttttgcta
gtgagcgtcacctgccgtctgagcctttcccagaccccagcagtaaccactacagaaccc
ctaaaagaggcggagctaaatgacaacatcaccatctttacccgaatactggacagactg
ctggacggctatgacaacaggctacgtcctggtctgggagagaaggtgaccgagatcaag
accaacatatttgtgaccagcttcggccccgtttctgatactgaaatggagtacaccata
gatgtgttcttcagacagagctggaaggacgaacgtctgcgtttccaaggccctatgaag
atgttaccgctaaacaacctcctggcgtctaacatctggaccccagacaccttcttcctc
aacgggaagaaatctatcgcccacaacatgaccacgcccaacaaacttctccgactcaaa
gacgacgggacactgctctacactatgaggttaaccatctcagcagaatgccccatgcag
ttagaggacttccccatggatgcccacgcctgtcctcttaagtttggaagctatgcgtat
cctgtgtctgaggtggtgtattcgtggacccagggagcagccaagtcagtggtggtggca
gaggaggggtcacgactcaaccagtatcatctgataggacagaccgctggcactgaggac
atctatactagcagaggtcagtacacagtgatgatgtgtcacttctatctgaagaggaag
atcggctatttcgtcatccagacttacatgccctgcttcatgaccgtcatcctctcccag
gtgtccttctggctcaaccgcgagtctgtccccgccaggactgtcttcggtgtgaccacc
gtgctgaccatgaccactcttagcatcagtgcccgtaactctctgcccaaggtggcgtat
gccacagccatggactggttcatagcagtctgttatgccttcgtcttctctgctcttatc
gagttcgctaccgtcaactactttaccaagaggagctgggcctgggatgggaagaaagcc
atggaggatacgcgtaagaaaaaccctacggctctgtccaagaaacctaacaacacctgt
tcagctggggtcagctacactcccaacctgactaaggacaatgccatctccaccatctcc
aacagcgcagacatccagctgaaactggctgaggtcaagaccccggaccccaaaaagact
tacaacagcgtcagcaagatcgacaagatgtcccgtatagtgtttcctgttctgtttggg
acattcaacctggtttactgggctacgtacctcaacagggaaccagtgatcaaaggagct
gtgaacccctatacatag
DBGET
integrated database retrieval system
