KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404888
Entry
139404888         CDS       T10872                                 
Name
(RefSeq) DNA repair protein REV1-like
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    139404888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139404888
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    139404888
SSDB
Motif
Pfam: IMS IMS_HHH_1 REV1_C IMS_C BRCT_2 POLH-Rev1_HhH BRCT LIG3_BRCT IMS_HHH UBM PTCB-BRCT Cdd1 HHH_5 DUF7674
Other DBs
NCBI-GeneID: 139404888
NCBI-ProteinID: XP_071003529
LinkDB
Position
3:77692455..77738661
AA seq 1450 aa
MSGDGRRKRDVDDNGWASRGGYMASKVSKLDEQFKLDAPREKLKDGACSSIFTGVAIYVK
GYTEPSVEELRRLMMLHGGQFHVYYSHSHTTHIIANNLPNSKIQELRDQKVVRPEWITDS
IKAGHLLSYLQYQLYAKQKGLSFPSVSVHQGQEPAGPLHGRHLPSHSLNNHNPAPSLGQP
LSSHSLPSHLGPQPSHLSPQPRHLTLRPSLLGPFSSNHFYSDPGHITHDPPSHGQPKLGC
IQPPPSAYTHPQTPGPVPANPSHEHSKPGQAQPPSILCISSHLQHSYRELDFRLNGSLLT
SYEKTRSVKMNGVQNLGGEDPCPVKTPRGVRDPTLTNGHTHPVNGAINPLDLSTIPTRHT
PTPDRGLLHTLQSIPSQPDSPLSKHPIQHDTPRPPPVSHHRHHAQPANEQRPKPPLPTYQ
EAMAASASRPLDLPSQSDFPPEKPLPIANPNPSPSPVCLNGSHHNVFPSNPTPLETNSLS
ANTFPSNPTPIETNSLSASTFPSNPTPLETNSLSAETFPSNPTHLETNSLSANPIPSKYA
PPHHDQQSAKVKTGGIISEFYSHSRLHHISTWRSEFSEYVNMLQSRMRATGGATFPGRDR
LRRQRREGLSTAPGPQSCILHVDMDCFFVSVGIRHRPDLKGKSVAVTSNHGSGRVAQRPG
VDRQLELQCYHKKYSYPAVSERKDGDLEEMTSSETESHISHGNSVDQDTAALSMAEIASC
SYEARQAGVRNGMFFGQAKQLCPSLQSVPYDFQAYKKVALAMYETLASYSHDIEALSCDE
ALVDSSALLAELSVTPDELASAIRADVRERTGCSASVGMGSNILLARMATRKAKPNGQYL
LRSEEVDDFIRDQTVTSLPGVGRSMGGKLASLGVRSCGDLQQVSLQRLQKEFGPRTGQTL
FRFCRGLDDRPVRSEKERKSVSAEMNYNIRFTQVDEAESFLTHLSVEVQKRLQGAGLRGR
RLTLKVMVCKAGVEQSNYRGHGTCDSLARSVTLAQLTDCGHLIASEVIKLFHTMRLKVQD
MRGVGLQVQLLEGPHSVLKDPSGPKTCYVRDKLLVQRPPAQPNYTDSLPNTDTCTSQENS
SSARVLSPFSTPRPTSPAEPIPGTSKGELPRTPNHVDNRLNLSIKVSPPSQVDRSVLEAL
PAELREQVEHSWTHRDTERTHNGSHQRPLHPGPSSPLSSCSSSPLSSSPPPPTAPPVGAL
VLQIPKQSGQTGSTGIILELPDFSQVHTHTHTHPQTFSLTATSPRLQEELHSVYGRRENT
QGIMDQRNPLLHLKHVGVGRMKRGYKKNPNNSPAKKGPSPLKRPRPPGNTPAKDLPHVLR
PRDLPNGLKLENGPSTSPLQQDDPETLSKFTPCPEPTLAGACDFKDIRTLLREWITTISD
PMEEDILQVVKYCTDLINDKDLEKLDLIIKYMKRLMQQSVESVWSMAFDFILDNVQVVVQ
QTYGSTLKIT
NT seq 4353 nt   +upstreamnt  +downstreamnt
atgagtggagatggacggaggaagagagacgttgatgacaacggttgggcttccaggggt
ggatacatggcttccaaggtgtccaagctggatgagcagtttaagctggacgccccgaga
gagaagctgaaagatggagcctgctccagcatcttcactggggtggccatctatgtcaaa
gggtacacagagcccagtgtggaagagctgcgcaggctgatgatgctgcatgggggtcag
ttccacgtgtactactcccactctcacaccacccacatcatcgctaacaacctgcccaac
agtaagatacaggagctgagggaccagaaggtggtccggccagagtggatcactgacagt
atcaaggctggccatctcctgtcctacctgcagtaccagctctatgccaagcagaaaggc
ctgagcttccccagtgtgtctgttcaccagggccaagagcctgcaggacccctccatggg
cggcacctacccagccacagcctcaataaccacaacccagcccctagccttgggcagccc
ctatccagccactctctccccagccacctcggcccccagcccagccacctcagcccccag
cccaggcacctcactctacgacccagcctcctcggtcccttttcctcaaaccacttttac
tctgacccagggcacatcacccacgacccacccagccacgggcaacccaagttaggctgc
atccagcctcctccttcagcctacacccacccacagacccctggtcccgtccctgcaaac
cccagccacgagcactctaaacctggacaggcacaacctccttccatcctctgcatctcc
agtcacctccagcacagctaccgggagctggacttcagactgaatggatcattactgacc
tcttatgaaaagactcggagcgtcaaaatgaacggggtccaaaacttgggtggtgaggac
ccctgtcctgtcaaaactcccagaggggtgagggaccccactctgaccaacggtcacacc
catcctgtgaatggtgccataaatcctctggacctctccacaatccccacacgacacaca
cccactccagacagggggttactccatactctccaatccataccctcacagcctgacagc
cccttatccaaacatcctatccaacatgacacccccagacctccccctgtctctcaccac
agacaccacgcacaaccggccaatgaacagagacccaagccccctctgcccacctatcag
gaggcgatggctgcctcggcatcccgccccctggatctcccgtctcaatcagatttccct
cctgagaaaccactccccattgctaacccaaacccctccccttcccctgtctgtctgaat
ggcagccaccacaatgtttttccttctaaccccacccccctggaaaccaacagcctatca
gccaacacttttccttctaaccccacccccatagaaaccaacagcctatcagccagcacc
tttccttctaaccccacccccctggaaaccaacagcctatcagccgaaacctttccttct
aaccccacccacctggaaaccaacagcctatcagccaaccccattccctcaaaatacgct
cctccgcaccacgaccaacaatcagcaaaggtgaagaccggggggatcatctcagagttt
tactcccactctcgtctacaccatatctccacgtggagaagtgagttctctgagtatgtc
aacatgttgcagagcaggatgagggccacagggggtgccaccttccccgggagagacagg
ctcagacgccagaggagagagggtttgtccactgctcctggccctcagtcctgtatcctg
catgtggacatggactgtttctttgtctccgtggggatcagacacagaccagacctcaaa
gggaagtctgtagcggtgaccagtaaccatggttcaggcagagtggcccagaggcctggt
gttgaccgccagctggagctgcagtgctaccataaaaaatactcctatccagctgtgtca
gagaggaaggatggggacctggaggaaatgacatcatcagagacggagagtcacatctcc
catggcaacagtgttgaccaggatactgctgccctctctatggctgagatcgcctcctgt
agctatgaggccaggcaggcaggggtgaggaatggtatgttttttggccaggccaaacaa
ctgtgtccctccctgcagtctgtcccttatgacttccaggcctacaagaaggtagccctg
gccatgtatgagactctcgccagttattctcacgatatcgaggccctgagttgtgacgag
gcgttggtggatagctctgccctgctggctgagttgagtgttacaccagatgagcttgcc
agtgccatccgagcagatgtcagggagagaactgggtgctccgcctcagtgggcatgggg
tccaacatcctgttggcgagaatggctacccgaaaggctaagccgaacggacagtacctc
ctgaggtcagaggaagtggatgacttcatcagggaccagacggtgaccagcctaccaggt
gtgggccgttctatgggtgggaaactggcatctctgggtgtgaggtcatgtggggacctg
cagcaggtgtctctgcagcggctgcagaaggagtttggccctcgcaccggtcagaccctc
ttcaggttctgccgaggtctggacgaccggcccgtccgtagcgagaaagagaggaagtcc
gtctctgctgagatgaactacaacatccgcttcacacaggtggacgaggcggagtcgttc
ctgacccacctgtccgttgaggtgcagaagcgtctgcagggggcggggctaaggggtcgc
aggctgaccctaaaggtcatggtctgtaaggcaggggtggagcaatccaactacagaggt
catggcacctgtgacagtttggctaggtcagtgaccctggcccagcttacagactgtggt
catttgatagccagtgaggtcatcaagctgttccacacaatgaggctgaaggtgcaggac
atgaggggggtgggcctccaggtgcagctcctcgaggggccccactccgtcctcaaggac
ccctcgggccctaaaacatgctacgtcagagacaagctgctggtccagcgcccccccgcc
caacctaactatacagattcgctacctaatactgacacatgcaccagtcaggaaaatagt
tcctctgccagagtcctgtcccccttctctactccccgccctacatcgcctgctgagcca
atcccagggacaagtaaaggagagctgccacgcacacctaaccatgttgataaccgcctt
aacctcagcatcaaggtctcccctccctcacaggtggaccggtcggtgttggaggccttg
cctgcagagttgagagaacaggtggagcactcctggacccacagagacacagagagaacc
cacaacgggtcacaccaacgcccccttcaccctggcccctcttctcctctctcttcctgt
tcatcttcccctctatcctcctctcctcctccccccactgcccctcctgtaggagcactg
gtgcttcagatccccaaacagtctggacagaccggctccacaggcatcatactggaactg
cctgacttctcccaggtacacacacacacacacacacacccacaaacattctcattaacg
gcaacatcccctagactccaggaggagctgcattcagtgtacggccgcagagagaacacg
caggggatcatggaccagaggaaccccctgttgcatctgaagcatgtgggggtgggtcgg
atgaagcgcggctacaagaagaatcccaacaacagccctgccaagaaaggcccctcccct
ctaaagaggccccgcccaccaggaaacaccccggccaaagacctaccacacgtgctcaga
cccagggacctacccaatggcctcaagctggagaatggaccttccacctcccccctacag
caggacgacccagagactctgtctaagttcaccccttgccctgaacccaccctggctgga
gcctgtgatttcaaggacatccgaacactactcagagaatggatcactaccatctcagac
cccatggaggaggacattctgcaggtagtcaagtactgcactgatctgatcaatgacaaa
gacctagagaaacttgacctgatcatcaagtacatgaagaggttgatgcagcagtctgtg
gagtctgtatggagcatggcctttgacttcatcctggacaacgtgcaggtggtggtacag
cagacctacggcagcactctgaagatcacgtag

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