Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404893
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Entry
139404893 CDS
T10872
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139404893
09143 Cell growth and death
04210 Apoptosis
139404893
09144 Cellular community - eukaryotes
04530 Tight junction
139404893
04540 Gap junction
139404893
09142 Cell motility
04814 Motor proteins
139404893
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139404893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139404893
03036 Chromosome and associated proteins [BR:
ocla03036
]
139404893
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139404893
04147 Exosome [BR:
ocla04147
]
139404893
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139404893
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139404893
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139404893
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139404893
Exosomal proteins of other body fluids (saliva and urine)
139404893
Exosomal proteins of colorectal cancer cells
139404893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139404893
NCBI-ProteinID:
XP_071003531
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTRGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaatgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
actcgtggcggtggagacgactccttcaacaccttcttcagtgagaccggagccggaaag
catgtcccccgagccatcttcgttgacctggagcccactgtcatcgatgaggtgaggact
ggtatctatcgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacatcgtgctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtggac
tacggaaagaagtctaagcttgagttcgccgtttacccagctccccaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggaacactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctcgatattgag
cgtccctcgtacaccaacctcaacaggctcattggtcagatcgtctcctccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgcttcgagccggccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaaaaccaagaggagt
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggtggttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcccgtctggaccacaagttcgacttgatgtatgcc
aagagagccttcgtgcactggtacgttggtgagggaatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggactatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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