Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404942
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Entry
139404942 CDS
T10872
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139404942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139404942
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
139404942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
Viral_helicase1
AAA_24
AAA_18
AAA_14
AAA_25
TIP49
NPHP3_N
AAA_5
ATPase_2
NACHT
ATPase
AAA_28
RNA_helicase
TsaE
Cytidylate_kin
RuvB_N
ABC_tran
AAA_17
AAA_33
AAA_30
bpMoxR
AAA_11
AAA_7
IstB_IS21
SLFN-g3_helicase
DUF815
Rad17
AAA_19
NB-ARC
DUF6393
Mg_chelatase
PduV-EutP
nSTAND1
AAA_3
PhoH
Sigma54_activat
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
139404942
NCBI-ProteinID:
XP_071003590
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MEGDRMEVGDLKQNPNDTNNIHVEVHVKSTSTAKRSDVKMHVLTLLNRHRMVFGAFRWTE
FDEDFLIKHVQSVAIVDAERKPIDLKSCSLSIHIFTLNDDGPSTLNLEEEEELSAANHWL
LPAAEFHGIWESLVYESGVKTQLLDYVSTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKT
SLCKALAQKLSIRLSNRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKQAL
VFVLIDEVESLTAARKASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKID
LAFVDRADIKQYIGPPSVEGIFNIYLSCLEELMKCQIVYPRQPLLTMFELETMGFRESKV
SELSLVLRDIAIKSKGFSGRALRKLPFLAHALFVKTPTVALERFLEAMDLAVDKQIEERD
NLVNCL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacagaatggaggtaggggatctgaagcagaaccccaacgacacgaacaac
atccatgtggaggttcacgtcaaatctaccagcactgccaagaggtctgacgtgaagatg
cacgtcttgaccctgctgaaccgtcatcgcatggtgttcggggccttcaggtggacagag
tttgacgaagacttccttatcaaacacgtccaatcagtggccatagtggacgctgagaga
aaacccatagatctgaagagctgcagtctgtccatccacatcttcaccctgaatgatgac
gggcccagcactctgaacctagaggaggaggaggagctctctgcagccaatcactggctc
ttaccagccgctgagttccatggcatctgggagagtctggtctatgagagcggggtcaaa
acacaactcttggattacgtctcaaccacaatttacttctctgacaaaaacgtggacagc
aacctgatctcatggaaccgagttgttctgcttcatggacccccgggcacagggaagacg
tctttgtgtaaagctctggcccagaagctgtcaatccgactatcgaaccggtactcttac
gggcagtttgttgagatcaacagccacagtttgttctccaagtggttctctgagagtggg
aaactggtcactaagatgttccagaagatccaacagctgatagatgacaagcaggctctg
gtgtttgttctcattgatgaggtggagagtctgacggcagcgcggaaagcctcccaggcc
ggaacggaaccctcagacgccatcagagtggtcaactctgtcctcacacagctggaccag
atcaagcggcatcctaatgttgtgatcctgaccacctccaacgtgacagagaagatagac
ctggcgtttgtggacagagctgacatcaagcagtacattggccctccgtctgtagagggc
atcttcaacatctatctgtcctgtctggaagaactgatgaagtgccagatcgtgtacccc
agacagccactgctgaccatgtttgagctggagaccatgggcttcagggagagcaaggtg
tcagagctcagcctggttctcagggacatcgccataaagagtaaaggttttagtggcaga
gcgctgaggaaactaccctttttggcccatgctctttttgtgaagaccccgacagtggcc
ctggagaggttcctggaggccatggacctggcagtggacaaacagatagaggagagggac
aacctggtcaactgtctgtga
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