Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404956
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Entry
139404956 CDS
T10872
Name
(RefSeq) gasdermin-E-like isoform X1
KO
K22146
gasdermin-E
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
139404956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139404956
Transporters [BR:
ocla02000
]
Other transporters
Pores ion channels [TC:
1
]
139404956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
139404956
NCBI-ProteinID:
XP_071003607
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MATFASATENFVKNVDSDGNLIPVSSLNNCGKLNPLSLVLKQSPFFMKTKYTPTKLTLDD
VFTKNTPLNPAVKESEFVDYSATFSDSRDASVDVETKLAADAVNVNFNMGAKHASTHKSS
LGKLKKEEVDLKWLQNNSKHKLLDMSHYLIQEARNSRSVFGVVMERIVTSEPCSIRVKKH
QAGKCGAGGKVTGVPVSVKGKGKVQEVKDVFLEIPKNTVIAYSIDEIMVQLDGHFEVRSF
GKGGFERAWNLVGSCNMPKVVSLPKECILRQELAKLRGHFQVLSSLPTAKRSSLLQLLKT
TMEDREAVSVLESVLDQMLVDETPDMDDLMEETEKQTVQTILDLLHESDGTNEGQTYDES
PSLLCSINLIVSAMNEMPDGCLSVLGSCCSPPILQALQILVQHVAAGSGETLSLRDAGLA
VLTEEELYQRIESLFGLSEVTLKREGDTLRTEMKDQPGYLPLVMSITVKGLASLVQGGRE
RERERETMQLLVELKN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtttgcctcagcaacagaaaactttgtgaagaacgtggattctgatggcaac
ctgatacctgtgtcctccctgaacaactgtggcaagttgaaccctctctcactggttctc
aaacagtcacctttctttatgaaaaccaaatacacgcctactaagttgaccctcgatgat
gtgtttaccaaaaatacacccttaaatccagctgtcaaggagtctgaatttgtggactac
agtgcgacatttagtgacagccgagatgccagcgtagacgtggagacaaaattggcggca
gatgcagttaatgtaaactttaacatgggggcaaaacacgcctccacacacaagtcgtcc
cttggcaaactgaagaaagaagaggttgacctgaagtggttacaaaacaactcaaaacac
aagcttctggacatgtcccactatctgatccaggaggcccgtaatagtaggtctgtgttt
ggggtggtgatggagaggattgtgacgagtgagccgtgctcgataagagtaaagaagcat
caggctggaaaatgtggtgctggagggaaggtcactggagtcccggtgtctgtaaagggg
aaaggcaaagtacaagaagtcaaagatgtgttcctggagattcctaaaaacactgtcatt
gcctacagcattgatgagatcatggtccaacttgatggacactttgaggtgcgctccttt
ggaaagggtgggtttgaaagagcctggaaccttgtaggttcatgcaatatgcccaaggtc
gtgtcgctcccaaaggaatgcatccttcgtcaagaactggcgaaactgaggggtcatttc
caggtgctgtcatccctgccaacagctaaacgctcctctctgctccagctcctcaagaca
accatggaggacagagaggcagtcagtgtactggagagtgtgctggatcagatgttggtt
gatgagacacctgacatggatgatcttatggaggagactgagaagcagacagtccagacc
atactggaccttttacatgagtctgatggaacaaatgagggccagacatacgacgagtca
ccctcactgctctgttccatcaacctcattgtcagcgccatgaatgaaatgccagatggg
tgtctctctgtgttgggatcctgttgcagtcctccaatcttacaggccctgcagattctg
gtgcagcatgtggcagcagggagtggggagaccctctctctgagagatgcaggtctggct
gttctgactgaggaggagctgtatcagaggatagagagtctctttggtctctctgaagtt
acactgaagagagagggggacacactgaggacagagatgaaggaccagcctggatacctt
cctctagtcatgagtatcactgtgaaaggcctggcctctttagtgcaaggagggagagag
agggagagagagagagagaccatgcaacttctagttgagctgaagaactag
DBGET
integrated database retrieval system
