Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404973
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Entry
139404973 CDS
T10872
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16-like isoform X1
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ocla04010
MAPK signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
139404973
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139404973
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139404973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ocla04050
]
139404973
04090 CD molecules [BR:
ocla04090
]
139404973
Cytokine receptors [BR:
ocla04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
139404973
CD molecules [BR:
ocla04090
]
Proteins
139404973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Death
TNFR_16_TM
bDLD3
TNFR_ELAPOR1_6th
TPR_21
DUF4911
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
139404973
NCBI-ProteinID:
XP_071003625
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MDALWVCTLFLFVNVALGDACVSGQFSQSGECCSPCPPGHGVEVECGMEDTKCQPCPEGT
FSPSDGLSPCLPCARCPAGIPELTSCSATQDTHCDCDQHFYLWRDGKSVAGLCAACTMCG
RGEGVVRLCGAQGNTQCTPCRPGTFSEEKSDIKPCQACSQCSDTEVEIRACQLNSDTLCM
DKKLHILSRPPESDGPLAAPRLPGLGLVNDGEEASPAPGGGAAPRAPGFTPQDDGSSNHI
LVYVSVLAAVVLGLLLYVAYKCWTSYKQKQALGKARAAELGTCPEGEKLHSDSGVFLDSH
SLQDGQPSKGSKRDSKQDGRLYINLPPHRQEEVERLLQEGSGGRRGSWRTLGAALGYEPE
QMDLFGHGEAPVHTLLSNWAQQEGSTLGLLCSALARIERPDVAAALTCPAQGVSVV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctttgggtctgcacactttttctgttcgtaaatgttgccctgggagatgcc
tgtgtcagtgggcagttcagccagtcaggggagtgctgtagcccgtgtcctccaggccat
ggggtggaggtagagtgtgggatggaggacaccaagtgccagccttgccctgagggaaca
ttctccccatcagacggtctctccccgtgcctcccctgtgcccgctgcccggctggcatc
ccagagctgacctcctgcagcgccacccaggatacccactgtgactgtgaccagcacttc
tacctttggcgggatgggaagagtgtggcagggctgtgtgccgcctgcaccatgtgtgga
cggggcgagggggtggtgaggctgtgtggtgcccaggggaacacccagtgcacaccatgt
cgcccaggaacgttctcagaggagaagagtgatatcaagccctgccaggcctgctctcag
tgctctgacactgaggtggagatcagagcctgccagctcaactctgacaccctctgcatg
gataagaagctccacatcctgtctcgtccccctgagtctgacggccctctggccgctcct
cgcctgcctgggttagggttggtgaatgatggagaggaggccagccctgcccctggagga
ggagcagcccccagggcccccgggttcacccctcaggatgatgggagcagcaaccacatc
ctggtctacgtatctgttctggctgctgtggtgctgggcctgctgctctacgtcgcctac
aagtgctggacgtcgtataagcagaagcaggcgttgggtaaagcccgcgctgcagagctg
gggacgtgtcctgaaggagaaaaactccacagtgacagcggcgtgttcctggactcacac
agcctgcaggatggccaaccaagtaaaggtagtaagagggacagtaagcaggacggccgt
ctgtacatcaacctgcccccccacagacaggaggaggtggagcgtctgctccaggagggg
agcgggggccgcagaggctcctggaggaccctgggggccgcgctgggctacgagcccgag
cagatggacctgtttggacacggcgaggcccctgtacacaccctcctttccaactgggct
cagcaggagggctccactctggggcttctgtgctcggcgctggcccgcatcgagaggccc
gacgtagctgccgctctcacctgccctgcccagggggtgtctgtggtctga
DBGET
integrated database retrieval system
