Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139404989
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Entry
139404989 CDS
T10872
Name
(RefSeq) thyroglobulin-like
KO
K10809
thyroglobulin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139404989
NCBI-ProteinID:
XP_071003654
LinkDB
All DBs
Position
Unknown
AA seq
2498 aa
AA seq
DB search
MSLVQISSILLCYLCLSEGKISEYQLESETLSQCESLRGGSSARQQDHVPQCSEDGRFRH
VQCSRAGGECWCVNAEGAEISGSRQNGSAVYCLTSCQLHRQQALLSGDAPLVPQCQASGE
YQAVQCDSARRQCWCVDLEGMELYGTRQNGKPSQCPGSCEVRSRRLLHGVGERSPPQCSA
DGSFLSVQCKFVNTTDRMVLDLLHTFNRFPKVFQMFSSFRQMFPEVSSYCFCADSRGREL
PSTGVELLLDEVYDTAFSGLEPGRSFSQTNMYRILQRRFLAIQLAMSGRFRCPSPCESER
SAGAQAGNVFVASCASDGGYVPTQCQAGGQCWCVDPTGKEIFGTRQHGGHPDCAGVKDCT
SERRQALSRLFSSPSGQVPSAKDSQTHPVPSPLSPCSPQLQQLLLGTLGESLPERSDLGD
ILAETIQGMFPSGAMALKALSLASNPKRLQENLFGGKFLGNAGMFNFTGAVGVSGTLSFS
QASLANNQDLVQLISATLENGDFLSTLRQTILLSKAEDSTQLGELFRVLFESAQSGGAGC
EREPSALYVPSCDDSGQYQEIQCRGSECWCADPQGQEVTGSRFNGQRPRCPSRCERERAA
AQKVKSGQAAGVEVFMPKCAEDGSYVALQCLGKSCFCLDLLGERHATVPVGQTVQCPPPP
SPLPSPGSAPGSCSLAVAEVDQFQEEAERLVLLSNSSHIPLGYSYLLAEGLRLTSDELLH
ALSSDQTTLLSDRLLSHSHSALRLAAHSTLRFYWQSQQAASVEERQSLLLGYQPYRPQCD
AHRQWLPTQCHPSTGQCWCVDEEGGYIPASLTSRSLQRPQCQTRCQRGYAQALLSDWTQS
SYDPTCEVSGQFSVLQKGSSGGGGAWCVSPVSGETIQPATLSSSGDLTCPSWCQLLTDRG
QSVVGYEPECQVDGRLFSPLQCDQTDCWCVSQTDGQELPGTRTPRATGKTPACDSPQCPS
PFSDITVTYGDVVCRSDVIGGQQNCDLICHLGYESTLPVNMQLLCDVETRAWVTEAPLPQ
ACQRLQVLQTVQTSVVLQLTLPPGQGPCSSSLHSSLQTSLLHDMRAQGLCSLQLTSVSVS
VCDESSVSVECVSEESVSVQVSWRALLSDLPVSVLPDLHDVDVALSEDRLLDGVLGLMGS
DPYRSILTSEPRVLSTSAPNFGCSHGYQRVGTGCVVCPAGMFSSGGVCSPCPQGSYQDQE
GSDFCTMCPKGTSTNGASTATHCLTECQRSGLRCSEGGDFLSAQQDIQTRRWRCVTSSGE
QLEWTTTGQPLSEGECSVLERFETVPRSAFSPAAEDYVVLSSEASDTTTEKQLRTCVSAC
AQVQTCLYVVLYAEEGQSHCELYSTDAANIRCQTSEQTKGFLGNAGADMFQNLSCSLKVN
GADRQNVTVIRKKGHEFTTKAQKTFERLSFRKASSGVYRTMVFAAEGTTLTDVHRFCQDE
CTQNTCCDGFILNQNVLSGGTIMCGLLSYPDMLLCSEADWDVSGLAKANRICGAGVTYNK
LQKQFIFNFGGQDFTITDTALPTSSKNKTDYQTTIIGFQGIYLWKESDMTTRPKTSPACS
SVLPQQAPRVVLSVKETFVALDSSAVVVDSERDLPSLQYWIFKHLFSAQEAQLWCLKRCE
EEELCHLADVRDESSVYFTCALYPDTQVCGAYDKPLRQACSPVLPQQPHTAHTKKVDLTG
SVESFYSRVPFKKMVSYSVRSRVNLSAKPITEGFRECERRCDEDPCCRGIGYVRDTQSPG
SDVLCLTLNSFGIQTCGEGERTTWRVQDCTPSRVETGVYPLGWYEKPVNQWTKSPRLCPS
FQLRVPSKNVSLSEWRLLDASSTLVDPSVSMFDIIHISKDIAEDLDRTRDWCLSACEEAE
SCVVVSVGRTDSAVRCVLYPDTLACGPSTTTTGGQDCRLVIRESALQVYLHKEPKAALTS
VFIPAHGTLQGSAVTTLLGSDRMTVRQFLGVPYARPPIRALRFVPPQPAEWSGTWNATIT
RPSCLQPGAVESSASSEDCLYLNIFIPSGIRGSAAVLVFFHNPSGAASDDTASLLDGSYL
AAVGNIVVVTVNTRVAAFGFLSTGSTALPGNAGFQDQVAALKWVQENIEAFGGDPRLVTV
GAERSGADVASLHLTSPSSRGLFDRMLLMGGSVFSPASVLSVSKAQGQAEALARELGCSS
SDPEQLGSCLRAAPAQDLNAAQTKLLSVSGPLQAWGPVVDGVSVQGKPSMALMNAGFHRA
DLLLGSSAEDGLISRAKRIKNFEELQGRADSKTAFYEALSNSLGGDDANAFVKAAATWFY
SMQHSPSPAGYNLFSQALNSATRDLFIVCPTIKMANFWAANTRSNVFMYYLPEDTAQTSA
DLSVPLDVHYAFGLPHSPLTYDLFTNTERRLSLQMMTYMANFIKSGNPNQAHSVSRVAFS
EAALPPWHAFQSHPEGDSYMEVEPGLSNHRGLRRAQCSFWADYVPSLTASTGKLSSAVSE
GESAGLGAGTPTPETKLFVDFLTTVTQSKPKSEKDAYN
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggttcagatctcctccatactgctgtgctacctctgtctgtctgaggggaag
atttcagaatatcaactggagtctgagaccctgagtcagtgtgagtctctacgtggtggt
agttctgcccggcaacaagaccatgtcccccagtgctcagaggacgggcgattcagacac
gtccagtgcagccgtgctggtggtgagtgctggtgtgtgaacgcagagggagctgagatc
tctggatccagacagaacggatcagctgtgtactgtctgacgtcctgccagctccacaga
cagcaggccctgctgagtggcgatgcccccctggtgccccagtgccaggcctctggggag
taccaggcggtgcagtgtgacagcgcccggagacagtgctggtgtgtagacctggaaggc
atggagctctacgggacccggcagaacggaaagccctctcagtgcccaggcagctgtgag
gtgaggtcgaggcgtctcctccacggcgtcggggaacgctccccccctcagtgctcggcc
gacggctccttcctgtccgtgcagtgcaagtttgtcaacaccactgacaggatggtcttg
gacctgctgcacacgttcaacaggttccctaaagtattccagatgttcagcagcttcaga
cagatgttcccagaggtgtccagttactgtttctgtgctgacagcagaggcagggagctc
cccagcacaggtgtggagctgctgctagatgaggtgtacgacacagccttctcaggtctg
gaaccaggccgctccttctcccagaccaacatgtaccgtatcctacagaggaggttcctg
gccatccagctggcgatgagtggcaggttcagatgccccagcccttgtgagagcgagcga
tccgctggtgcccaagctggcaatgtgtttgtggcgtcctgtgcttccgacgggggttac
gtgccaacacagtgccaggcgggtgggcagtgctggtgtgtcgaccccacagggaaggag
atctttgggacacgacaacatggaggacaccctgactgtgctggagtgaaggactgtacc
tctgagcgtcgccaggccctctccaggctcttctccagcccctcaggtcaggtgccatca
gccaaggactcacagacacacccagtcccaagccccctgtctccatgcagcccccaactc
caacagctcctgttggggactcttggagagtctctccccgagcgatccgatttaggagac
atcctggctgagacgatccaggggatgttccctagcggggccatggccctcaaggcccta
tctttagcctccaaccccaagagactccaggagaacctgttcggaggaaagttcttagga
aacgctgggatgtttaacttcactggggccgtcggtgtcagcggcacgttgagtttcagt
caagccagtctggcaaacaaccaagatctggttcaactcatcagcgccaccctggaaaac
ggagacttcctctccaccctacgccaaaccatcctcttatccaaagccgaggacagcacc
cagctaggtgagctgttcagggtcctgtttgagagcgcccagtccggtggtgctggatgt
gagagggagccctctgccctgtacgtgcccagctgtgatgacagcggccagtatcaggag
atccagtgccgaggctcggagtgttggtgtgctgacccccagggtcaggaggtcacgggg
tcacgtttcaatggtcaaaggccaaggtgtccgtcacgatgcgagagggagcgagcggct
gctcagaaggtgaagtcaggccaggctgctggggtagaggtgttcatgccgaagtgtgca
gaggacgggagctacgtggcgttgcagtgtctgggaaagagttgcttctgtctggacctc
ctgggagagagacacgccactgtccctgtaggacagactgttcagtgtcctccccctccc
tctccccttccctccccagggtcagctccaggctcctgttccctggcggtggctgaggtg
gaccaattccaggaggaggctgagcgtctggtcctcctctccaacagctcccacatccct
ctgggctacagctacctgctggctgaaggtctccgtctgacctctgacgagctactccac
gccctctcctccgaccagaccacgctgctctctgataggctgctgagccactcacactct
gctctacgacttgctgcccactccactctgcggttctattggcagagccagcaggcagca
tctgtggaggagagacagtctctactgctgggctaccagccctacaggccccagtgtgat
gcccacagacagtggctgcccacccagtgccaccccagcacaggtcagtgttggtgtgtg
gatgaggaaggaggatacatcccagcttccctgaccagtcgctccctccagagaccacag
tgccagacccggtgtcagagaggttatgctcaggctctgctctctgattggacacagtcc
tcctacgacccaacttgtgaagtgagtggccagttctctgtgctccagaaggggtcttca
ggtggaggtggagcctggtgtgtcagtcctgtttctggggaaaccatccagcctgctacc
ctgagttccagtggagacctcacatgtcctagctggtgtcagttgttgacagacagaggt
cagtctgtggtgggttatgagccggagtgtcaggtggatggaaggctgttctccccactg
cagtgtgaccagacagactgctggtgtgtgtctcagacagatggacaggagctgcctgga
accaggacgccacgcgccaccgggaagaccccagcctgtgacagtccccagtgtccctct
ccgttctctgacatcaccgttacctacggtgatgtggtctgtcgctctgacgtgattggt
ggccagcagaactgtgacctcatctgtcacctgggttacgaaagcacacttcctgtaaac
atgcagttactgtgtgacgtggagaccagagcctgggtgacagaggccccacttcctcaa
gcctgccagagacttcaggtgctgcagaccgtccagacctctgtggtgctccagctcacc
ctgcctccaggccagggaccctgcagctcctccctccactccagcctgcagacctctcta
ctccacgacatgagggcccagggtctctgcagcctgcagctgacgtccgtctctgtgtcc
gtgtgtgatgagtcgtccgtctctgtagagtgtgtgagtgaggaaagcgtcagtgttcag
gtcagctggagggctcttctctcagaccttcccgtctctgttctgcctgacctgcatgac
gtcgatgtagcgctcagtgaggacaggctgttggatggggtgctaggcctgatgggtagt
gacccctaccgctccatcttgacctctgaacccagagtcctctctacctcagcacccaac
tttggctgttcccatggctaccagcgtgttggaacaggatgtgtggtgtgtcctgcgggt
atgttttccagtggaggtgtgtgttctccctgtcctcagggctcctaccaagaccaggag
gggtcagacttctgtaccatgtgtcctaaaggcacgtccactaacggagcttccactgcc
acacactgtttgacagagtgccagcgcagtggcctgaggtgttcagagggaggggacttc
ctgtcggcccagcaggacatccagaccaggaggtggcgctgtgtcacatccagcggagaa
cagctggagtggacaaccactggccagcctctgtctgagggagaatgttcagttctggag
aggtttgagacagttcccagatcagcgttttctccagcagcagaagactatgtcgtcctc
agctcagaggcgtcagacacgaccacggagaaacaactcaggacgtgtgtctcagcttgt
gcccaggtccagacttgtctttacgtcgtcctttacgctgaagaaggacaaagtcactgt
gaactctacagcaccgacgctgctaacatccgatgccaaacctctgagcaaaccaaaggg
ttcctgggaaatgcaggtgctgatatgttccagaacctgagctgttctctgaaggtgaac
ggggctgacagacagaacgtcacggtcatcaggaagaaaggtcatgaattcaccactaag
gcccagaagacctttgaaaggttgagtttccgtaaggccagttctggtgtgtaccgtacc
atggtgtttgcagctgaaggaaccactctgaccgacgtccatcgtttctgtcaggacgag
tgtacccagaacacctgctgtgacggcttcatcctcaaccagaacgttctcagcggaggt
accattatgtgtggtctgctgagctacccagacatgttgctatgcagtgaggcagactgg
gacgtgtctggcctggccaaggcgaacaggatctgtggggctggagtcacctacaataaa
ctgcagaaacagttcatctttaactttggaggacaagacttcactatcacggatacagct
ctgccaacatcaagcaagaacaaaactgactaccagaccaccattattggtttccaaggc
atttacctctggaaagagtctgacatgaccactcgtcccaagacctccccagcctgtagc
agtgtcctcccacaacaagccccccgagtcgttctgtcggtgaaggagacgtttgtggcc
ctggacagcagtgctgttgttgtggactctgaacgggacctccccagcctgcaatactgg
atctttaaacatctgttctctgcacaggaggctcagctgtggtgtctgaaacgctgtgag
gaggaggagctgtgccacttggctgatgtgagagatgagagctcagtgtactttacctgc
gccctgtacccagacacccaggtgtgtggggcctacgacaaacccctgagacaggcctgc
agccctgtgctcccccagcaaccccacaccgctcacaccaagaaggttgatctgactgga
agtgtggagagtttttacagccgtgttccctttaagaagatggtgtcttattccgtccgt
agccgtgtcaacctgagtgccaagcctatcactgaggggttccgtgagtgtgaacggaga
tgtgatgaagacccgtgttgccgtggaatcggatacgtcagggacacacagtcacctgga
tcagacgttctctgcctgactctgaacagctttggtatccagacgtgtggtgaaggagaa
cggacaacctggagagtccaggactgcaccccctccagagtagaaaccggagtgtatccg
cttggctggtacgagaaaccagtgaaccagtggactaaatcaccacggttgtgccccagt
ttccaactacgagttccttcaaagaacgtgagtttgagtgagtggagactcctggatgcg
tcctctactctggtggatccgtccgtctccatgtttgacattattcacatcagtaaagac
atcgctgaggacctggacaggaccagagactggtgtctgtctgcctgtgaggaggctgag
tcctgtgttgtggtgtcagtggggcggaccgactcggctgtccgctgtgtcctctaccca
gacaccctggcctgtggcccctccactaccaccaccggaggtcaggactgtcggctggtc
atcagagagtcagctctccaagtctacctccacaaagaacccaaggcggcgttgacgtca
gtgtttatcccggctcacggaacgctccagggatcggccgtgacaacgctgctcgggtca
gacaggatgacagtcagacagttcttgggagttccgtacgctcgtcctcctatcagagcc
ctccgtttcgtacccccacagcctgctgaatggagtggcacatggaacgccacgattacc
agacccagttgtctgcagcctggagctgtggagtcatcagccagcagtgaggactgtctg
tacctcaacatcttcatccccagcggcatcagagggagtgcagcggttctggtgttcttc
cataacccgtctggagcagccagcgatgacacagcatctctactggacggctcctacctg
gctgccgtcggcaacatcgtcgtggttaccgtcaacaccagggttgcagcgttcggattc
ctcagcacagggtccacagccctgccaggtaacgccggcttccaggaccaggtagccgct
ctgaagtgggtccaggagaacattgaggcgttcggaggtgaccccaggctggtgacggtg
ggggcagagcggagtggagccgacgtggccagcctacatctgacctccccctcctcgcgt
ggtctcttcgacaggatgctgctcatgggtggctctgtgttctcccctgcctcagtgctg
agtgtatctaaagcccaggggcaggctgaggctctggcccgggagctgggctgttcctcc
tctgacccagaacagctgggctcctgcctgagagcagctccagcacaggacctcaacgct
gcccagaccaagttgctgtcagtcagtgggcccctgcaggcttggggtccagtggtggat
ggggtctctgtccaggggaaaccctccatggccctgatgaatgcaggcttccacagagct
gacctcctgctgggctcctccgcagaggatggactcatcagcagggccaagaggatcaag
aactttgaggagctccaggggcgagctgacagtaaaacagcattctacgaagccctgtcc
aactctctgggtggagacgatgccaatgcgtttgtcaaggctgcagccacctggttctac
tccatgcagcactctccctctccagctggctacaacctcttctctcaggctcttaacagt
gcaaccagagatctcttcattgtgtgtcccaccataaagatggccaacttctgggcagct
aacaccagatccaatgtgttcatgtactacctgcctgaggacaccgcccagaccagtgct
gacctgtcagtacccctggatgtccactatgcctttggcctcccccacagccccctgacc
tatgacctgttcaccaacacagagagacgcctctccctacagatgatgacctacatggcc
aacttcatcaagtccggaaatcccaaccaggctcacagtgtgtcccgcgtggccttcagc
gaggcggcgcttcccccctggcatgccttccagtctcaccctgagggggacagctatatg
gaggtggagccaggcctcagcaaccacaggggcctccgcagggcccagtgctccttctgg
gccgactacgtcccctctctgaccgcctccactggcaaactttcatctgctgtgtcggaa
ggggaatctgctggtttgggggctggaactccaacaccagaaaccaagttatttgttgat
ttcttgacaactgtcacccagagcaaacccaagtcagagaaggatgcttataattag
DBGET
integrated database retrieval system
