Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405150
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Entry
139405150 CDS
T10872
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla03273
Virion - Lassa virus and SFTS virus
ocla04140
Autophagy - animal
ocla04142
Lysosome
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139405150
03272 Virion - Hepatitis viruses
139405150
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139405150
04142 Lysosome
139405150
04140 Autophagy - animal
139405150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139405150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139405150
04090 CD molecules [BR:
ocla04090
]
139405150
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
139405150
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
139405150
Other autophagy associated proteins
RNautophagy/DNautophagy
139405150
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
139405150
CD molecules [BR:
ocla04090
]
Proteins
139405150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
139405150
NCBI-ProteinID:
XP_071003674
LinkDB
All DBs
Position
3:complement(78679939..78689065)
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AA seq
253 aa
AA seq
DB search
MTQQHSRKQPLSIAFIALLAVTLHQSFAATDAPPTAAPQTTAPPPAPPARPERGNYTVTN
GNGTACLMARMGLQLNVSFSSASLNKTVLEVVNLQPNLTKSSGSCDLDSATLLLKADERA
TSLTLVFSLNATSSKYHLSGVTLLAAWPDMHVPFSAGNRSLDYLRGTLGRSYMCREEQTL
AVTVNFSLNTFQLQVQPFGLKGDQFGAAEECQLDEDDMLIPIIVGAALAGLVLVVLVAYL
IGRKRSHAGYQTI
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaacatagccgcaagcaacctttgtccattgcattcatcgcgcttttagcg
gtcacgttgcatcagagctttgctgccactgacgccccgcccactgctgcccctcaaacc
acggctccgcctcctgcacccccggctcggcccgagagaggcaactacactgtaaccaac
ggcaatgggaccgcctgtctgatggcccgcatgggactgcagctcaatgtcagcttcagc
tctgcctctctcaataagactgtgctagaggtggtgaacctgcagcccaacctgactaag
agctcagggtcatgtgacttggacagcgccaccctactgctgaaggctgacgagagggca
accagtctcaccctcgtcttctccctgaatgccacgtccagtaagtaccacctcagtgga
gtgaccctgttggcagcctggccggacatgcatgtgcccttctcagccggtaaccgtagt
ctggactacctgcgtggtaccctggggcgtagttacatgtgtcgtgaggagcagactctg
gctgtgactgtcaacttctctctcaacaccttccagctgcaggtgcagcccttcggcctc
aaaggggaccagtttggagcagcggaggagtgtcagctggatgaggatgacatgttgatc
cccatcatcgtgggcgctgcgctggctggcctggtcctcgtcgttctcgtggcctacctc
atcggcaggaagaggagccacgctggctatcagaccatctaa
DBGET
integrated database retrieval system
