Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405170
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Entry
139405170 CDS
T10872
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139405170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139405170
NCBI-ProteinID:
XP_071003689
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MNKREQLTSNLSGEREEEGPASKTSLSGEHDTKTKSPIKQKRPASPVPNCVSMKSDQSMG
QPISFREGDFSTEQRNQQERSESEILSGQSSQSHQTDLASIFSLLEEKIMTFVKNELKTF
KRILSPELPEGFESQKQDKEVLDAEDEKQESSAREGALKITLHILRKMNLKELADTLEKN
SDELAVICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEVNNEHELR
QIETTTRKQARPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIGKTVSVQKFILDWAEGK
TNQDVQFVFSFPFRELNLMKEDKHTFIELLNHFSMETKQSGISIYNKYKVLFIFDGLDEC
RLPLDFPKNKICCDVTESTSVDVLLTNLIRGNLLPSALLWITTRPAAANKIPSGCVDQVT
EVRGFNDPQKEEFFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVFCWISATILEHMLKH
KREEMPKTLTEMYTHLVVFHTKQKNEKYLGKEETGPHWNKESILSLGKLAFQQLVNGNLI
FYEEDLKEAGIDVNEASVYSGLCTQLFKEECVLYQDKVYCFVHLSIQEFLAAVYVFLSFI
NNNQNLMDKLQTNDKSEVTFYKSAVDKALQSETGNLDLFLRFLLGLSLESNQKHLRGLLT
KTRSSSQSHEETVKYIKEKIRENPSPERCINLFHCLNELNDHSLVEGIQRFLRSGSLSKP
NLSPAQWSALVFVLLTSEKELDVLDLKKYSRSEEGLLRLLPVVKASRVVLLSGCGVTEEG
CASLVSVLRSNPSHLRELDLSNNDLKDSGVKLLSDGLGNPHCKLETLRLSGCLVTEEGCA
SLVSALRSNPSHLRELDLSYNHPGDTGVRLLSAGLEDPHCRLEKLNVEHGGENRMKPGLR
KYVCDLTLDLNTVNRHLSLSEENRKVTCRREEQPYPDHPERFEDCRQVLFKEGLTGRCYW
EVERSGRADIGVTYKGISRRGRGDDCGLGYNDKSWSLTCSDNSYRARHNNILTTIDVSST
SSHRVGVYLDWPAGTLSFYRASSDTLTHLNTFTCTFTEPLYPGFWVQYESSVSL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagagaacaattgacatccaatctctctggggagagagaggaggagggccct
gcctctaaaacgagtctctctggggaacatgacaccaaaactaagagcccaatcaagcag
aagagaccagcctcccctgtacccaactgtgtgtccatgaagagtgaccagtctatgggt
caacctatatcctttagagagggagacttttctactgaacaaagaaaccaacaggagaga
tcagagtcagagattctcagtggtcagtcttcccagagtcatcaaacagacctggcctcc
atattcagtttgcttgaagagaaaattatgacatttgtgaagaacgaactgaagacgttc
aagaggattcttagtccagaactcccagaaggctttgagagtcagaagcaggataaggaa
gtgttggacgctgaagatgagaagcaggagagcagtgccagagagggggctctgaagatc
acactgcacatcctgaggaaaatgaacttgaaggagcttgctgacacactggagaaaaat
tcagatgagcttgctgtgatttgccaacgtgaactcaaatctaatctaaagaagaagttt
caatgtgtatttgaggggatcgctaaacaaggaaacccaacacttctcaataagatctac
acagagctctacatcacagagggtggaacaggagaggtcaataatgaacatgagttgaga
cagattgagacaacaaccaggaaacaagcaagaccagagactgcaatcaaatgtaacgac
atcttcaaacccttaactggacaagacaaacctatcagaactgtgctgacaaagggagtc
gctggcattggaaaaacagtctctgtgcagaagttcattctggactgggctgaaggaaaa
acaaatcaggatgtccaatttgtattttcattcccttttagggagctgaatttgatgaaa
gaggacaaacacactttcattgaacttcttaatcacttctcaatggaaaccaaacaatca
ggaatctctatctacaacaagtacaaagttctgttcatctttgatggtctggatgagtgc
cgactgcccctagacttcccgaagaacaagatctgttgtgacgtcacagagtcaacctca
gtggatgttctgctgacaaatctcatcaggggaaatctgcttccctctgctctcctctgg
ataactacccgacctgcagcagccaataagatcccttcagggtgtgttgaccaggtgaca
gaggtacgagggttcaatgacccacagaaggaggagttcttcaggaagagattcagtgat
gaggacctggccagcagaatcatctcacacataaagacatcaaggagcctccacatcatg
tgccacattccagtcttctgttggatttctgcaacaatccttgaacacatgctgaaacat
aagagagaagagatgcccaagactctgactgagatgtacacacaccttgtggtgtttcat
accaaacagaagaatgaaaagtatcttgggaaagaagagacaggtccacactggaataaa
gagagcattctgtcactgggaaaactggcttttcaacagcttgtgaatggcaatctgatt
ttctatgaagaagacctgaaagaggctggcattgatgtcaatgaagcctcggtgtactca
ggattgtgcacacagctctttaaagaggaatgtgtgctgtaccaggacaaggtgtactgc
tttgttcatctgagcattcaggagtttctggctgctgtatatgtgttcctctcattcatc
aacaacaatcagaatctaatggacaaactgcaaacaaacgacaagtctgaagttactttc
tacaagagtgctgtggataaagccttacaaagtgagacaggaaacctggaccttttcctc
cgcttccttctgggcctctcactggagtccaatcagaagcacttacgaggtctactgaca
aagacaagaagcagctcacagagccatgaagaaacagtcaagtacatcaaggagaagatc
agggagaatccctctccagagaggtgcatcaatctgttccactgtctgaatgaactgaat
gaccattctctagtcgaggggatccaaagattcctgagatcaggaagtctctcaaaaccc
aacctgtcacctgcacagtggtcagctctggtctttgtgttgctgacttcagaaaaggag
ctggatgtgcttgacctgaagaaatactccagatcagaggaaggtcttctgaggctgctg
ccagtggtcaaagcctccagagttgttctgctgtcaggctgtggagtcacagaggaaggc
tgtgcttctctggtctcagttctgaggtcaaacccctcacacctgagagagctggatctg
agtaacaatgacctgaaggattcaggagtgaagctgctctctgatggactggggaatccc
cactgtaaactggagactctgaggctgtcaggctgtttagtcacagaggaaggctgtgct
tctctggtctcagctctgaggtcaaacccctcacacctgagagagctggacctgagctac
aatcacccaggagacacaggagtcagactgctctctgctggactggaggatccacactgc
agactggagaaactcaatgtggaacatggtggagagaacagaatgaaacctgggcttaga
aaatatgtctgtgatctcacactggacctaaacacagtaaacagacacctctctctgtct
gaggagaacaggaaggtgacatgtaggagagaggagcagccgtatcctgatcacccagag
agatttgaggactgtagacaggtgctatttaaagagggtctgactgggcgctgttactgg
gaggtagagaggagtgggagggctgatataggagtgacatataaaggaatcagcaggaga
ggaaggggtgatgactgtggtcttggatacaatgacaagtcctggagtctgacctgctct
gacaacagttacagagccagacacaataatattctcactaccatagacgtctcctccacc
agctcccacagagtaggagtgtatctggactggccagctggcactttgtccttctataga
gcctcctcggacacactgacccacctgaacacattcacctgtacattcactgagcccctc
tatccagggttttgggttcagtatgaatcctcagtgtccctgtaa
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integrated database retrieval system
