Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405171
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Entry
139405171 CDS
T10872
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139405171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139405171
NCBI-ProteinID:
XP_071003690
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MSLSGEREEGVPASKMSLSGEHDTKAKSPIKQERPASPVPSCVSMKSDKSMDLPIFFREE
EFSTEQRNQQERSESEILSGQSSQSHQTDLASIFSLLEEKIMTFVKNELKMFKRNLSPEL
PEGFESQKQDKEVVDAEDEKQESNAREGALKITLHILRKMNQKELADTLEKYSGELAVIC
QREIKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEVNNEHELRQIETTTRK
QARPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQDVQFV
FSFPFRELNLMKVDQHTFIELLNHFSMETKQSRISNYDKYKVLFIFDGLDECRLPLDFQK
NKICCDVTESTSVDVLLTNLIKGNLLPSALLWITSRPAAANKIPSGCVDQVTEVRGFNDP
QKEEYFRKRFSDEDLASRIILHIKTSRSLHIMCHIPVFCWISATVLEHMLKQKREEMPKT
LTEMYTHLVVFLTKQKNEKYLGKEETGPHWNKESILSLGKLAFQQLAKGNLIFYEEDLKE
AGIDVKEASVHSGLCTQLFKEECGLYQDKVYCFVHLSIQEFLAAVYVFLSFINNNRNVMD
KLQSTSRSFSVRIKQRRKVSFYKSAVDKALQSETGNLDLFLRFLLGLSLESNQKHLRGLL
TKTRSSSQSHEETVEYIKEKIRENPSPERCINLFHCLNELNDHSLVEEIQRYLRSGSLSG
AILSPAQWSALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVKASRAALLSGCGVTEE
GCASLVSALRSNPSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKLETLRLSGCLVTEEGC
ASLVSAMRSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGGENTMKPGI
RKYVCDLTLDPNTAHRLLSLSEENRKVTWRREKQPYPDHPERFENWEQVLCREGLTGRCY
WEVERSGREAVIGVTNKGINRRGGVNDCCLGCNDKSWSLFCSDNSYTAWHNNNPTTIDVP
SSSSHRVGVYLDRPAGTLSFYRASSDTLTHLFTFTSTFTEPLYPGFGVWFNGDSVSLK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggggagagagaggagggggtccctgcctctaaaatgagtctctctggg
gaacatgacaccaaagctaagagtccaatcaagcaggagagaccagcctcccctgttccc
agctgtgtgtccatgaagagtgacaagtctatggatctacctatattctttagagaggaa
gaattttctactgaacaaagaaaccaacaggagagatcagagtcagagattctcagtggt
cagtcttcccagagtcatcaaacagacctggcctccatattcagtttgcttgaagagaaa
attatgacatttgtgaagaacgagctgaagatgttcaagaggaatcttagtccagaactc
ccagaaggctttgagagtcagaagcaggataaggaagtggtggatgctgaagatgagaag
caggagagcaatgccagagagggggctctgaagatcacactgcacatcctgaggaaaatg
aaccagaaggagcttgctgacacactggagaaatattcaggtgagcttgctgtgatttgc
caacgtgaaatcaaatctaatctaaagaagaagtttcaatgtgtatttgaggggatcgct
aaacaaggaaacccaacacttctcaataagatctacacagagctctacatcacagagggt
ggaacaggagaggtcaataatgaacatgagctgagacagattgagacaacaaccaggaaa
caagcaagaccagagactgcaatcaaatgtaacgacatcttcaaacccttaactggacaa
gacaaacctatcagaactgtgctgacaaagggagtcgctggcattggaaaaacagtctct
gtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtccaatttgta
ttttcattcccttttcgggagctgaatttgatgaaagtggaccaacacactttcattgaa
cttcttaatcacttctcaatggaaaccaaacaatcaagaatctccaactatgacaagtac
aaagttctgttcatctttgatggtctggatgagtgccgactgcccctagacttccagaag
aacaagatctgttgtgacgtcacagagtcaacctcagtggatgttctgctgacaaatctc
atcaagggaaatctgcttccctctgctctcctctggataacttcccgacctgcagcagcc
aataagatcccttcagggtgtgttgaccaggtgacagaggtacgagggttcaatgacccg
cagaaggaggagtacttcaggaagagattcagtgatgaggacctggccagcagaatcatc
ttacacataaagacatcaaggagcctccacatcatgtgccacattccagtcttctgttgg
atttctgcaacagtccttgaacacatgctgaaacagaagagagaagagatgcccaagact
ctgactgagatgtacacacaccttgtggtgtttcttaccaaacagaagaatgaaaagtat
cttgggaaagaagagacaggtccacactggaataaagagagtattctgtcactgggaaaa
ctggcttttcaacagcttgcgaagggcaatctgattttctatgaagaagacctaaaagag
gctggcattgatgtcaaggaagcctcggtgcactcaggattgtgcacacagctctttaaa
gaggaatgtgggctgtaccaggacaaggtgtactgctttgttcatctgagcattcaggag
tttctggctgctgtatatgtgttcctctcattcatcaacaacaataggaatgtaatggac
aaactgcaatcaacgtccaggagcttttctgtgaggatcaaacaaaggcgtaaagtttct
ttctacaagagtgctgtggataaagccttacaaagtgagacaggaaacctggaccttttc
ctccgcttccttctgggcctctcactggagtccaatcagaagcacttacgaggtctcctg
acaaagacaagaagcagctcacagagccatgaagaaacagtcgagtacatcaaggagaag
atcagggagaatccctctcctgagaggtgcatcaatcttttccactgtctgaatgaactg
aatgaccattctctagtggaggagatccaaagatacctgagatcaggaagtctctctgga
gccatcctgtcacctgcacagtggtcagctctggtctttgtgttgctgacttcagaaaag
gagctggatgtgtttgacctgaagaaatactccagatcagaggaaggtcttctgaggctg
ctgccagtggtcaaagcctccagagctgctctgctgtcaggctgtggagtcacagaggaa
ggctgtgcttctctggtctcagctctgaggtcaaacccctcacacctgagagagctggat
ctgagtaacaatgacctgaaggattcaggagtgaagctgctctctgctggactggggaat
ccccactgtaaactggagactctgaggctgtcaggctgtctagtcacagaggaaggctgt
gcttctctggtctcagctatgaggtcaaacccctcacacctgagagagctggatctgagc
tacaatcacccaggagactcaggagtcagactgctctctgctggactggaggatccacac
tgcagactggagaaactcaatgtggaacatggtggagagaacacaatgaaacctgggatt
agaaaatatgtctgtgatctcacactggacccaaacacagcacacagactcctctctctg
tctgaggagaacagaaaggtgacatggaggagagagaagcagccgtatcctgatcaccca
gagagatttgagaactgggagcaggtgctgtgtagagagggtctgactgggcgctgttac
tgggaggtagagaggagtgggagagaggctgttataggagtgacaaataaaggaatcaac
aggagaggaggggttaatgactgttgtcttggatgcaatgacaagtcctggagtctgttc
tgttctgacaacagttacactgcctggcacaataataatcccactaccatagacgtcccc
tcctccagctcccacagagtaggagtgtatctggacaggccagccggcactctgtccttc
tatagagcctcctctgacacactgacccacctgttcacattcacctccacattcactgag
cccctctatccagggtttggggtttggtttaatggtgactcagtgtccctgaaataa
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