Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405221
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Entry
139405221 CDS
T10872
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139405221
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ocla04031
]
139405221
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
139405221
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
139405221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
139405221
NCBI-ProteinID:
XP_071003754
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDIANRWSFEGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWKPNRVFTLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANAAGGSKGNSLKRSKSIKPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggtacccagggcagcccggtgaagagttatgactacctgttgaagttcctcctggtc
ggggacagcgatgtggggaaaggggagatactagacagcctacaggatggatcggcagag
tctccgtacgcgtacagcagcggcatcgactacaagaccaccactattctgctggatggg
aggagagtgaaactggagctgtgggacacgtcaggacaggggaggttctgcaccatcttc
aggtcctactccagaggggctcagggaatcctgctggtgtatgacatcgcaaaccgctgg
tcgttcgaaggcatcgaccgctggatacgagagattgacgagcatgccccgggtgtacct
cgtatcctggtaggcaaccggctccacctggcgttcaagcggcaggttcctacggagcag
gcccgggcgtacgcggagaagaacggcatgaccttctttgaggtcagcccgctctgcaac
ttcaacgtcatcgagtcgttcacagagctgtctcgcatcgtactgatgaggcacggcatg
gagaagttctggaagcccaacagagtcttcactctccaggacctgtgctgcagagcgatt
gtctcctgcacgcccgtccacctgatcgacaagctgccgttgcccgtggcgataaagtcc
cacctcaagtccttctctatggccaatgggatgaacgcagtgatgatgcacggacgttcc
tattcgctggccaacgcggcgggcgggtctaaagggaacagtctgaagcgttcaaaatct
atcaaacccccccagagccccccacagaactgcacacgcaacaactgtaaaatctcctag
DBGET
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