Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405224
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Entry
139405224 CDS
T10872
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
139405224
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
Glycosaminoglycan
139405224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139405224
NCBI-ProteinID:
XP_071003760
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Position
Unknown
AA seq
948 aa
AA seq
DB search
MVGNMCGRKLARRSKSALIVALTVLLVQTLIVWNFSTLDTGEEAGEGANSRREKRDQVGG
INKAYSQYPRSGLPKRHHQPPLGKTAVRHKQQPEGYHSWHPKEKVLLDSNNNENSVPKDF
DTVVDGNSNLGARSLSERQRMAGNTAKHKPDKVLRQGILGKAFPNEVNKVIQQYPLPPQQ
PGGVGLKDYHAYKRPRPHSQLSTKPARASPSPSIKTSNQHQRHHQPRKSATAAPVQGQRR
EKHQCEISGKEAISALSRAKTRECRQQIAEVYCRHKERTLMPETVPRYCTIEGKANVNVQ
WDEGSEQTAPAVPVRIVFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQVG
ALASQYSNVRVTSWRMSTIWGGASLLTMYLRCMDDLLKMADWNWDFFINLSAADYPIRTN
EQLVGFLTKYRDMNFIKSHGRDNTRFIRKQGLDRLFFECDTHMWRLGDRKIPEGIAVDGG
SDWFLLNRMFVDYIINSEDELVVSMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLRI
TNWNRKLGCKCQYKHIVDWCGCSPNDFKSPDLPRFQQTSRPTFFARKFEASVNQEIVTQL
DSFLFGPYPQETPGLQSYWENVYDETDSVASLSDSQLTHYHAFTRMGLSRAATSLQGHPD
NNSCRYIPRGHPVSVHLYFLSDVFQGYLVRQHVSNLATSQLETLETWVSHSNHFTLAPAT
NTLNRLQFAEVGTDWDAKERIFRNFGSLLGPTEEPVAMQRWGRGQNVTVTVVWVDPTNVI
AATYDILVDGGTEYTHYRPPLTVPLRPGVWTLRVLHHWNLLASTSFVVSPLEHHGQQPIR
QEDTVKLHSGPVRNSYMDQSFHGLNPILNLPVHLGQVEEAEFKASLTGAELQSWVDHLLA
GVWSAADVCSQGPSSCPVMQRCRETGWSALSPDPKSDLGPPRGNGRIR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaatatgtgcggtcgcaagctggctcgccgctccaaatcagcgctgatagtc
gcgctgacagttctcctggttcagacgctgatcgtgtggaactttagtaccctggatacc
ggggaagaagcgggcgaaggggccaatagtaggcgggagaagagggaccaagtcgggggc
atcaacaaagcctacagccagtacccccggagcgggctgccaaagaggcatcaccaacct
ccgcttgggaaaacggctgtccgacacaagcaacaaccggagggctaccactcctggcat
cccaaggagaaagtcctcctggatagtaacaacaatgagaactcggtccccaaagacttt
gacactgttgttgacggcaacagcaaccttggggcgcggtcactgtctgagcgccagcga
atggcaggaaacaccgccaaacacaaaccggacaaggtcctaaggcaaggcattctggga
aaggcctttcccaatgaggtcaacaaggttattcagcagtaccctcttcctccacagcag
cccggaggagtgggacttaaagattaccacgcatacaaacgacccagaccacactcccag
ctgtccactaaacccgctagagcttccccctctccctccatcaaaacatccaatcagcat
cagcgacatcaccaacccaggaagtcggcgactgcggctcctgtgcaggggcagcggagg
gagaagcaccagtgcgagatcagtgggaaggaggccatctcggctctgtcgagagccaag
accagggagtgtcgtcagcagatagctgaggtgtactgcagacacaaggagaggacactg
atgccggagaccgtccctcgatactgcaccatagaaggtaaggccaatgtgaatgtacag
tgggatgagggttcagagcagactgcccctgctgtgcctgttcgcatcgtcttcgtcttg
gtggtccatggcagagcgtctcggcagttccaacgcctgttcaaggccatctaccatacc
tcacactattactatatacatgtagaccagcgttccaactacctccacagacaggtgggg
gctctagcgagccagtactccaacgtccgtgttacttcctggaggatgtccaccatttgg
ggcggggcgagcctgctcaccatgtacctgcgttgcatggacgaccttctcaagatggcc
gactggaattgggacttcttcatcaacctcagtgcagccgactaccctatcaggaccaat
gagcagctggtgggcttcctgacaaagtaccgggacatgaacttcatcaaatcccacggc
agagacaacacacggttcatccgtaagcagggtctggaccggctcttcttcgagtgtgac
acacacatgtggcgcctaggcgaccgcaagatcccagaaggcattgcggtggacggaggt
tccgattggttccttctgaaccgcatgtttgtggattacatcatcaactctgaagatgag
ctggtcgtcagcatgaagcgcttctacgcatacacactgctgcctgccgagtcgttcttc
cacacagtgctagagaacagtgctcactgtgagagtatggtggacaacaacctgcgtatc
accaactggaacaggaagctgggctgtaagtgtcagtacaaacacatcgtagactggtgc
ggctgctcccccaatgacttcaaatctcctgacctgccacgctttcagcaaacgtccagg
cctacgtttttcgcccgtaaatttgaggctagcgtgaaccaggagattgttacccagctg
gacagcttcctgtttggcccttatccacaggagaccccagggctccagtcgtactgggag
aatgtgtacgatgagacggacagcgttgccagcctatcagacagccagctcactcactac
cacgccttcacacgcatgggcctatcacgggccgccacgtcactgcagggtcaccctgac
aacaacagctgcaggtatatccccaggggccacccggtgtctgtccatttgtacttcctg
tcagacgtgttccaaggctacctggttcgtcaacatgttagtaacctagcaaccagccag
ctagagaccctagagacttgggtctcccatagcaaccacttcaccctggccccggcaacc
aacacactcaacagactacagtttgcagaggtgggtacagactgggacgccaaagagaga
atcttcaggaacttcggaagcctcctgggccccacggaggagccggttgccatgcaacgc
tggggccggggacagaacgtcacggtaaccgtggtctgggtggaccccaccaacgtcata
gccgccacgtacgacatcctggtggacggcgggacagagtacacacactaccggcccccg
ttaaccgtgccgttacgacccggcgtgtggacgctgcgtgtgttgcatcactggaacctg
ctggcctccaccagctttgtggtttcacctctggagcaccacggccagcagcctatacgc
caggaagacacagtgaagctccacagcgggccggtccgtaactcctacatggatcagagt
ttccacggcctcaaccccatcctcaacctcccagtgcacctgggacaggtggaggaggcg
gagtttaaagcatcactgacaggggcggagctccagagctgggtggaccatctcctggca
ggggtgtggtctgcagcggacgtgtgttctcagggtcctagctcctgtcccgttatgcag
cggtgtcgggagacgggatggagcgcgctcagtcccgaccccaagtctgatctgggtccc
cccagagggaacggacggattaggtag
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