Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405230
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Entry
139405230 CDS
T10872
Name
(RefSeq) F-box/LRR-repeat protein 16-like
KO
K10282
F-box and leucine-rich repeat protein 16
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139405230
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139405230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_FBXL15
LRR_6
LRR_SKP2
LRR_4
LRR_At1g61320_AtMIF1
LRR_Zer-1
LRR_14
LRR_EndoS
LRR_8
LRR_RPS2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
139405230
NCBI-ProteinID:
XP_071003767
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MLNMSTPSELKSPCVPRNGMVKLPPQPNGLGSASITKGTPAAKNRLCQSSSVPGILPPPS
LPYHLDPLNPLGPSLLGPDLDHSPLMALKPPLRQVPLTFPKPHLPLTLPLALLPPLERQL
ALDEKLLNRLLWYFTTAEKCVLAQVCRTWRKVLYQSKFWEGVTPILHAKELYALLPGGDK
EFVSLQAFALRGFQAFCLVGVSDLDICEFIDNYPLSKKGVKSVSLKRSTITDAGLEVMLE
QMQGLMHLELAGCNDFTEAGLWSSLNARLTSLSVSDCINVADDAIAAISQLLPNLSELSL
QAYHVTDTAMAYFTAKQGYTTHTLRLHSCWEITNHGVVNMVHSLPNLTALSLSGCSKITD
DGVELVAENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDRCVRITDTGLGYLST
MSSLRSLYLRWCCQVQDFGLQHLFGMRSLRLLSLAGCPLLTTTGLSGLIQIQDLEELELT
NCPGATAELFKYYSQHLTRCMVIE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacatgtcgacccccagcgagctcaagtctccgtgtgtcccgaggaacggcatg
gtcaagctcccccctcagcccaacggtttgggcagcgccagcatcaccaagggcacgccc
gccgccaagaaccgcctgtgccagtcctcctccgtgcccggcatcctacccccgccttcc
ctaccctaccacctggaccccctcaaccccctgggtccctctctcctgggtccagacctg
gaccacagccccctgatggccctcaaacccccgctgcgccaggtccccctcaccttcccc
aagcctcaccttcccctcaccctgcctctggcccttctgccgcccctggagcgccagctg
gccctggatgagaagctgctcaacaggctgctgtggtatttcaccacggctgagaagtgt
gtcctggcccaggtgtgtaggacctggaggaaagtgctgtaccagtctaagttctgggag
ggtgtcacgcccatcctccacgccaaggagctgtacgccctgctccccggcggagacaag
gagtttgtcagcctgcaggccttcgctctcagggggttccaggcgttctgtctggtggga
gtttcagacctggacatctgtgagttcattgataactaccccttgtccaagaagggggtg
aagtcggtcagtctgaagaggtccaccattacagacgcaggcctggaggtgatgctggaa
cagatgcagggtctgatgcacctggagttggccggttgtaatgacttcacggaggccggt
ctgtggtccagcctgaacgcacggctcacctcgctcagcgtcagcgactgtatcaacgta
gcggacgacgccatcgctgccatctcacagctactgcccaacctgtcagagctcagcctg
caggcctaccacgtaaccgacacagccatggcttacttcacagccaaacagggctacacc
actcacacgctgcgtctccactcgtgttgggagatcaccaaccatggtgtggttaacatg
gtccacagcctgcccaacctcacggctctgagcctgtcaggctgctctaaaatcactgat
gatggggtggagctggtagcagagaacctgaggaagctgcggagcctggacctctcctgg
tgcccacgcatcactgacatggccctggagtacatcgcctgtgacctccacaaactagag
gagctggtactggacagatgtgtgaggattacagatacaggtctaggttacctgtccacc
atgtcttctttgaggagtctctacctgcgctggtgctgtcaggtgcaggactttgggcta
cagcacctgtttggcatgaggagtctacgtcttctctctctcgcaggttgtccactccta
accactacaggtctatctggtttgatccagattcaggatctagaggagttggagttgacc
aactgtcctggagccacagccgaactcttcaagtactactcacaacacctgacacgctgc
atggtcatcgagtag
DBGET
integrated database retrieval system
