Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405429
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Entry
139405429 CDS
T10872
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
ocla04141
Protein processing in endoplasmic reticulum
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139405429
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
139405429
Membrane trafficking [BR:
ocla04131
]
SNARE
SNARE associated proteins
Others
139405429
Autophagy
Aggrephagy
Other aggrephagy associated proteins
139405429
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139405429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139405429
NCBI-ProteinID:
XP_071003858
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MPAPGGTDPKGEDFSTAILKQKHRPNRLVVDEAHNEDNSIVSLSQAKTEELQLFRGDTVV
LRGRKRRETVCIVLTDDTCPDERVRMNRVTRNNLRVRLGDVISVHACPDVKYGVRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPAPHCIVAP
DTVIHCEGQPINREDEEESLTDVGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRTHVIVMAATNRPNSIDPALR
RFGRFDKEIDIGIPDSTGRLEILQIHTKNMKLSDDVDLERVSMDAHGHVGSDLAALCSEA
ALQAIRKKMTLIDLEDDTIDAELLNSLAVTNDDFRWALGQSNPSALRETVVEVPNVNWED
IGGLGEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSNKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDTASRTAILN
ANLRKSPIARDVDLAYLSGITQGFSGADLTEICQRACKLAIREAIEAEIKAERQRQTHPG
TGMDEDCDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGSQ
SGGQGSGSGGQFRDEVEDDLYQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccctggaggaacagatcctaagggggaggatttctccactgctatcctgaag
caaaaacacagacccaatagactggtggtggatgaagcccacaatgaagacaacagcatc
gtcagcctctcacaggcgaagacagaggagctgcagttgttccgtggcgacacggtggtc
ctgcgggggaggaagcggcgtgagacggtgtgtatcgtgttgacagacgacacctgtcca
gacgaacgcgtccgcatgaaccgcgtcacacgcaacaacctgagggtacgcctcggtgat
gtcatcagtgtccatgcatgcccagatgtgaagtacggcgtgcgtatccatgtcctgccg
atagatgacaccatcgaagggttaacgggaaacctgttcgacgtcttcctgaaaccctat
ttcttggaagcctatcgacctgtacacaaaggcgacatcttcctggtgcgagggggcatg
cgggctgtggagttcaaggtggtggagacagatcccgccccccactgcatcgtcgccccg
gataccgtcatccactgcgagggacagccaatcaacagagaggacgaggaggagagtctg
actgacgtaggctatgatgacattggaggttgtcgtaaacagttagctcaaatcaaagaa
atggtggagcttcccctcagacatcctggactattcaaggctataggagtcaagcctccc
aggggtattctgctgtatggacctccaggtacagggaagacactggtcgcccgggccgtc
gccaacgagactggagcattcttcttcctcatcaatggtcctgagatcatgagtaagatg
gccggggagtcagagagcaacctgaggaaagccttcgaggaggcagagaaaaactctccc
gccattattttcatagacgaactggattctatcgctcctaagagagagaagacccatggg
gaggtggagaggcgtatcgtatcacagctcctcaccctgatggatggactcaagcagaga
actcacgttatcgtcatggcagccaccaacagacccaacagcatcgaccctgccctgaga
cgcttcggcaggtttgacaaagagatcgacatcggcatcccagactccactggtagactg
gagatactgcagattcacaccaagaacatgaagctatctgacgacgtggacctggagagg
gtttccatggatgcgcatggccatgtggggtcagacctggcagctctgtgttctgaggcg
gctctgcaggccatcaggaagaagatgaccctgattgatctggaggacgacaccattgat
gctgaactgctcaactcactggcagttaccaacgatgacttcaggtgggcgttggggcag
agtaacccgtcagctctgagggagacagtagtggaggttcctaatgttaactgggaggat
ataggaggactgggagaggtcaagagagaactgcaggaactagtacagtacccggtggag
tacccagataagttcctgaagttcggtatgaccccgtcacgaggagtgttattctatgga
cccccaggctgtggaaagaccctgctagccaaggcgattgctaacgagtgccaggccaac
ttcatctccatcaagggacctgagctgctcaccatgtggttcggcgagtcagaggctaat
gtcagggacgtcttcgacaaggccagacaggcggccccctgcatcctgttctttgacgag
ctggactccattgccaagtccagagggggcggagccggggacgcagggggcgcggccgac
agggtcatcaaccagatcctcacggagatggacggaatgtccaacaagaagaacgtcttt
attataggagctaccaacagacctgatataatagactctgctatcctccgtccagggagg
ctggatcagctcatctacatccctctaccagacacagcctcccgtaccgccatcctcaac
gcaaacctacgcaagtcccccatcgccagagatgtagacctggcctacctgtctggtatc
acccagggtttcagtggggcagacctgacagagatctgccagagggcctgtaagctggcc
atcagagaggccatagaggctgagatcaaagcagagcgccagagacagacccacccaggc
accggcatggatgaggactgtgaccctgttccagagatcaggaaggatcactttgaagag
gccatgaggttcgcccggcgctccgtcagcgacaacgatatcaggaagtatgagatgttc
gcccagacactacagcagagcagaggctttgggaacttcaggttcccctctggctctcag
tccggaggtcaagggtcggggtcaggggggcagttcagagacgaggtagaggacgacctc
taccagtga
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integrated database retrieval system
