Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405516
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Entry
139405516 CDS
T10872
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139405516
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139405516
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139405516
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
139405516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
139405516
NCBI-ProteinID:
XP_071004019
LinkDB
All DBs
Position
3:82703566..82709547
Genome browser
AA seq
1111 aa
AA seq
DB search
MAPVQQEPEIQFAQRLASNERPMRTKAIKKLRKYIRVRSQKIQGGFEGDELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLIHSFQNIQSQFMFLETFLQTIKREWTGIDRLRMDKFFQL
VRFVFRNTFEMMKRKEWETSVVTRFLELLTAQVLHSSSGAPCGLQFHILDIYMTELAAVG
SAELTAAQNMTFIDPFCKTASKTKDRILLRAICSSIFSAIVDQAPFAIEDLLKEVKATGG
GAEESDSGQASEEEEGLEKDPPKGKKTAKEALKKNTGGQTNGTVSTEEDDDDDEEDGLGD
EDDDEMLHMESDSESEMPDDAGIGPVLQFDYLSLADRLFGLARRSNTPSHNRQRLYKVVK
TLRDLSEGVFPQDEYPEEVSTDEDDDEMFGSRKRMKRGRGFGEEEEEEESSPAKKWKGKK
KDSKARTSDQTAATDDSKPAETPGDSNNKKKKKKKRRRKKKKTTGEVKTEEQNGVAAKSE
VKVEEDTTPASAPQTADSKDAETEPSIPAKGTDTGASLLKEKAKVVAMETGVQSGTPQDV
VVGNLSSVTVMEVDQKKQSETPVPDATSSKKKNIKKPKTPAPKQKEEVAEPAKSAPETAT
TTPSRRKNTKQEPEEQTTVEEVEMALETVDETTATPPKKKRRRRRNKVKRNAETDTTQVD
LEPDSTPAEEPPVDLRIAATPLKKKKLKVAKAGEESAGGETRPGTEADVLVVDTKVEPAC
VATSTPLKKKKHATAEEQSVEAEGETPPKADANLTLIDAEVQTLEAATPTPLKKKKHATA
EVQTLEAATPTPLKKKKYATAEVQTLEAATPTPLKKKKYATAEVQTLEAATPTPLKKKKY
ATAEVQTLEAATPTPLKKKKHATAEVQTLEAATPTPLKKKKHPTAEVQTLEAATPTPLNK
KNKSSGLVEQEPETTTVEESVSEEQPTDADLDTPLKKGKKKRKVPVVIEFEAEVNGMAGG
KKAKLSNDSRELSTPVSAKKTKKMTPKKAGAESDFITFQNHATIPTPLFFKTTKGSPSTP
LSSKKKKCPTPKSESKKVTFGLNKNKTAEFRKTDRSLLVSPEGSSRVPFDPQQKPLFGVL
KSPEASLTKSTKKTKSTLKTTPKRPTAADFF
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtacaacaagaaccagagatccagttcgctcaaagattggcttctaatgag
aggcccatgcgaacaaaagccatcaagaagctaagaaaatatattcgtgttaggtcacag
aaaatccaaggtgggtttgaaggtgacgagttactcaaactatggaaaggcctcttttat
tgcctgtggatgcaggacaagccacttcttcaggaggagctgtcgaatcagatctctggc
ctgatacacagcttccagaacatccagagccagtttatgtttctggagaccttcctgcag
accatcaaaagagaatggactggcattgacaggcttcgcatggataagttcttccagctg
gttcgtttcgtgttcaggaacacttttgagatgatgaagaggaaagaatgggagaccagt
gtggtgaccaggtttctggagctcctgactgcccaggtcctccacagctccagcggggct
ccctgtggattacagttccacatactggacatctatatgaccgagctggctgcagtcggc
tcagctgagctcacagcggctcagaacatgacattcattgaccctttctgcaaaacagcg
tctaaaacgaaagatcggatcttgctcagggctatctgcagcagcattttcagcgccatc
gtggaccaggctcccttcgccattgaagacctgttgaaggaagtgaaggctacaggtgga
ggggctgaggagtccgactcgggacaggcttctgaagaggaggaggggctagagaaggat
ccccccaagggcaaaaaaactgcaaaggaagccctcaagaaaaacactggagggcagacc
aatggtactgtgtcaactgaggaagatgatgatgatgatgaagaagatggtctgggcgat
gaagacgatgacgaaatgcttcacatggagagtgactccgagtctgagatgccagatgac
gcggggatcggacctgttctccagtttgactaccttagcctggcagaccggctgtttggg
ctagccagacgcagcaacacccctagccacaacagacagagactgtacaaagtcgtcaag
actctccgggatctcagtgaaggagtctttccacaggatgagtacccagaggaggtgtcg
acagatgaggacgatgatgaaatgtttggcagcagaaagaggatgaaacgaggacgaggc
ttcggggaggaggaggaggaagaagagagctcaccagccaagaaatggaaaggcaagaaa
aaagactccaaagcaagaacgtctgaccagactgccgcaacagatgacagcaaaccagca
gagactcccggagactccaataacaagaagaagaagaagaagaagaggaggaggaagaag
aagaagacgactggagaggtgaagactgaagagcagaacggggtggcggcgaagtcggag
gttaaggttgaggaggacacaactcctgcttctgcaccgcagacggcagactctaaagat
gcagagacggagccctctatcccagccaagggcaccgatacaggagcgtctctcctgaag
gagaaggcaaaggtggtagccatggagacaggggtccaatcaggaactccacaggatgta
gtggtaggtaacctgtcatctgtcacagtcatggaggtagaccagaagaaacaatcagaa
actccggtaccagacgccacatcttccaagaagaaaaatatcaagaagcctaaaacgcct
gcaccgaagcagaaggaagaggtagcagaaccagcaaagtctgcccctgagactgctact
accaccccaagcaggagaaaaaataccaagcaggagcctgaggagcagaccaccgtagag
gaagttgaaatggcgttagaaacagtagacgagaccacggccaccccaccgaagaagaag
aggaggaggaggaggaacaaggttaaacggaacgctgagacagacacaacacaggtggac
cttgaaccagactctaccccagccgaggagcctccagttgacctccgcatcgccgccact
cccctgaaaaagaagaaactaaaggtggcaaaggcgggagaggagagcgccgggggtgaa
acacggccaggaactgaagcagacgtccttgttgtagacaccaaggtggagccggcgtgt
gtcgctacatcaaccccgctcaagaagaagaaacatgccacggccgaagaacagagtgtg
gaggccgaaggtgaaaccccgccgaaagcagacgcaaacctcacactgatcgacgctgag
gtacagacgctggaggccgccacacctaccccactcaagaagaagaaacatgccacggct
gaggtacagacgctggaggccgccacacctaccccactcaagaagaagaaatatgccacg
gctgaggtacagacgctggaggccgccacacctaccccactcaagaagaagaaatatgcc
acggctgaggtacagacgctggaggccgccacacctaccccactcaagaagaagaaatat
gccacggctgaggtacagacgctggaggccgccacacctaccccactcaagaagaagaaa
catgccacggctgaggtacagacgctggaggccgccacacctaccccactcaagaagaag
aaacatcccacggctgaggtacagacgctggaggccgccacacctaccccactcaataag
aagaataaaagctctggactggtagagcaggagccagagaccacgacagtggaggagagc
gtgtcagaggagcagcctacagatgctgacctggacacgcccctgaagaaagggaagaag
aagaggaaggtcccggtagtgatagagttcgaggctgaggtcaacgggatggctggaggc
aagaaagccaaactgagcaacgacagcagagagctttccacgccggtgagcgccaagaaa
acaaaaaaaatgactcccaagaaggcaggggcggagtctgacttcatcacgttccagaac
catgccaccatccctactccccttttcttcaagaccaccaagggaagtcccagcacaccg
ctatccagcaagaagaagaagtgtccgactccaaagtccgaatccaagaaggttaccttc
ggactcaataaaaacaaaactgcagagttcaggaagactgaccgcagcctgctggtgagt
ccagaggggtcatcccgagtgccctttgacccccagcagaagcccctgtttggggtcctg
aagtccccagaggcctctcttaccaaaagcactaagaagaccaagagcaccctgaaaacc
acccccaaacgccccaccgcggctgacttcttctag
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