Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139405535
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Entry
139405535 CDS
T10872
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04517
IgSF CAM signaling
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139405535
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139405535
09143 Cell growth and death
04210 Apoptosis
139405535
09144 Cellular community - eukaryotes
04530 Tight junction
139405535
04540 Gap junction
139405535
09142 Cell motility
04814 Motor proteins
139405535
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139405535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139405535
03036 Chromosome and associated proteins [BR:
ocla03036
]
139405535
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139405535
04147 Exosome [BR:
ocla04147
]
139405535
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139405535
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139405535
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139405535
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139405535
Exosomal proteins of other body fluids (saliva and urine)
139405535
Exosomal proteins of colorectal cancer cells
139405535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139405535
NCBI-ProteinID:
XP_071004049
LinkDB
All DBs
Position
3:complement(87058671..87062487)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccatgcatgtgggccaagccggagtccagatgggtaatgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
acttgtggaggtggagacgactccttcaacaccttcttcagtgagaccggagccggaaag
catgtcccccgagccatcttcgttgacctggagcccactgtcatcgatgaggtgaggaca
ggtacctatcgccagctgttccaccctgagcagctgatcactggtaaggaggatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgacctggttctggac
aggacacgcaaactggctgaccagtgtacaggtctccaggggttcctcatcttccacagc
ttcggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtggac
tacggaaagaagtctaagcttgagttcgccgtttacccagctccccaggtgtccacggct
gtggtggagccctacaactccatcctgaccactcacaccaccctggaacactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctcgatattgag
cgtccctcgtacaccaacctcaacaggctcattggtcagatcgtctcctccatcactgcc
tccctgcgattcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctccgctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaatgcctgcttcgagccagccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcttgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccatcaagaccaaacgtacc
atccagtttgtggactggtgtcccactgggttcaaagtgggcatcaactaccagccccca
acagcagttcctggaggagacctggccaaggtccagagggctgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcccgtctggaccacaagttcgacttgatgtatgcc
aagagagccttcgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggactatgaagaggtgggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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